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Record W2041508847 · doi:10.1097/icb.0b013e31804d1de0

DE NOVO MUTATION IN A CHOROIDEREMIA CARRIER

2007· article· en· W2041508847 on OpenAlexaff
Simge Bozbeyoğlu, Gerald A. Fishman, Edwin M. Stone, Ian M. MacDonald, Luan M. Streb

Bibliographic record

VenueRetinal Cases & Brief Reports · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRetinal Development and Disorders
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsChoroideremiaProbandMedicineExonMutationGeneticsFundus (uterus)Point mutationGeneStop codonOphthalmologyBiology

Abstract

fetched live from OpenAlex

In Brief Purpose: To describe a de novo gene mutation in a female patient with clinically characteristic findings of choroideremia (CHM). Methods: Determination of best-corrected visual acuity, fundus examination, visual field analysis, and electroretinography were performed on a female patient with an advanced CHM phenotype. Blood samples were obtained from the patient and both her parents, and direct genomic sequencing for DNA analysis was performed on the blood samples. Results: A single base-pair sequence change was identified in codon 293 in exon 7 (R293X) of the CHM gene in the proband. This mutation was not found to occur in her clinically unaffected parents. Conclusion: These findings document that a de novo point mutation should be considered when an isolated female family member is found to have CHM. Best-corrected visual acuity measurement, fundus examination, visual field analysis, and electroretinogram testing were performed for a woman with an advanced choroideremia (CHM) phenotype. Blood samples were obtained from the patient and both her parents, and their DNA was analyzed by direct genomic sequencing. A single base-pair sequence change was identified in codon 293 in exon 7 (R293X) of the CHM gene in the proband. This mutation was not found to occur in her clinically unaffected parents. These findings document that a de novo point mutation should be considered when an isolated female family member is found to have CHM.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.265
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2007
Admission routes1
Has abstractyes

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