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Record W2041543723 · doi:10.1139/x08-190

Ecotypic mode of regional differentiation caused by restricted gene migration: a case in black cottonwood (Populus trichocarpa) along the Pacific Northwest coast

2009· article· en· W2041543723 on OpenAlexaffvenueabout
Chang-Yi Xie, Cheng Ying, Alvin D. Yanchuk, Diane L. Holowachuk

Bibliographic record

VenueCanadian Journal of Forest Research · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBioenergy crop production and management
Canadian institutionsGovernment of British Columbia
FundersJohns Hopkins University
KeywordsPopulus trichocarpaBiologyBotanySalicaceaeEcologyWoody plantGene

Abstract

fetched live from OpenAlex

Genetic differentiation of black cottonwood ( Populus balsamifera subsp. trichocarpa (Torr. & A. Gray ex Hook) Brayshaw) across a “no-cottonwood” belt on the coast of central British Columbia (BC), Canada, was examined using data on 3 year height, severity of infection by Valsa sordida Nitschke and Melampsora occidentalis H. Jacks., and abnormality of leaf flushing. The data were collected in a common-garden test consisting of 180 provenances of 36 drainages ranging from northern BC to Oregon, USA. The results demonstrated an ecotypic mode, north–south regional differentiation. Valsa sordida and M. occidentalis infected 41% and 89%, respectively, of the trees from the northern region, while 66% showed flushing abnormality. In contrast, only 1% and 27% of their southern counterparts were infected by the same diseases, and 1% had abnormal flushing. Trees from the northern region averaged 87% shorter than those from the south. Regional differentiation accounted for the highest amount of variation observed in all traits, with 60% in 3 year height, 34% in V. sordida, 76% in M. occidentalis, and 50% in abnormal leaf flushing. Regression analysis revealed geographic patterns that essentially reflected regional differentiation along the no-cottonwood belt. The species’ distribution biography, ecological characteristics, and life history suggest that restricted gene migration was the main factor responsible for the observed geographic patterns of genetic differentiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.829
Threshold uncertainty score0.912

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.265
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations41
Published2009
Admission routes3
Has abstractyes

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