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Genotype × Environment Interactions in Conventional versus Pasture-Based Dairies in Canada

2003· article· en· W2044744715 on OpenAlexaffabout
P. Boettcher, J. Fatehi, M.M. Schutz

Bibliographic record

VenueJournal of Dairy Science · 2003
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of Guelph
FundersU.S. Department of Agriculture
KeywordsSireGrazingHerdBiologyAnimal scienceHeritabilityPastureVeterinary medicineGene–environment interactionBiotechnologyAgronomyGenotypeMedicineGenetics

Abstract

fetched live from OpenAlex

The objective of this study was to evaluate effects of genotype x environmental interaction (GxE) on dairy traits among herds in Canada that practice intensive rotational grazing versus conventional methods that rely on stored feeds. Based on responses to questionnaires, 22 herds were selected for the grazing group and the conventional group consisted of 34 large free-stall dairies. Production data consisted of 6,749 lactations of 2,817 cows in the grazing herds and 29,371 lactations of 12,774 cows in the control herds. Subsets of data for reproduction and conformation also were created. Per cow production was greater in the conventionally managed herds (9,947 kg of milk) than in the grazing herds (9,400 kg). Phenotypic data were regressed on sire predicted transmitting abilities (PTA) and genetic correlations for all traits were estimated between environments. A scaling effect was observed across environments for yield traits, as phenotypic differences among cows were greater than predicted by sire PTA in conventional herds and consistent with sire PTA in grazing herds. Heritabilities for yield also were greater in conventional herds. Other effects of GxE were minor, with genetic correlations of near 0.90 or greater for all traits. Among yield traits, genetic correlation was lowest for fat (0.88 with SE = 0.04). These results demonstrate that effects of GxE are small between the two types of management systems analyzed and that graziers can accurately select sires based on national rankings.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.057
Threshold uncertainty score0.115

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.242
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations80
Published2003
Admission routes2
Has abstractyes

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