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Record W2046227875 · doi:10.1139/b04-171

Microfungal endophytes in roots

2005· article· en· W2046227875 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCanadian Journal of Botany · 2005
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyMicrofungiBotanyFungusSymbiosisGlomeromycotaHyphaTaxonEndophyteMutualism (biology)EcologySeptateHost (biology)CommensalismMycorrhizaBacteria

Abstract

fetched live from OpenAlex

A wide range of ascomycetous microfungi inhabits roots without forming the anatomical features typical of mycorrhizas or causing overt signs of pathogenesis. The most-studied taxa have darkly pigmented hyphal walls and are referred to as "dark septate endophytes" (DSE). We provide a dichotomous key and annotated descriptions for a cross-section of the most common dark septate endophytes. The term DSE is sometimes used to imply taxonomic and physiological similarity even though a diverse range of root endophytic taxa form pigmented hyphae. Among these, Phialocephala fortinii Wang & Wilcox is a well-known representative; it is widespread, easily observed in roots, and readily grown in culture and with plants. Nevertheless, the basis of its symbiotic relationship with plants remains ambiguous. It may be a weak pathogen, a saprotroph on senescent root tissues, or a mutualist. More detailed studies of interactions between identified taxa of microfungal endophytes and host plants are necessary to elucidate the functional basis of these symbioses; it may be necessary to look beyond the paradigms of traditional mycorrhizal and pathogenic associations to understand the ecological roles of these fungi. Reports of cryptic speciation in Phialocephala fortinii emphasize the need for accurate identification of isolates of microfungal endophytes used in experiments.Key words: dark septate endophytes (DSE), Phialocephala fortinii, mycorrhiza, fungus–host interactions, fungi.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.755
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.184
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it