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Record W2048091229 · doi:10.1158/0008-5472.sabcs-2140

The thiazolidinedione peroxisome proliferator-activated receptor gamma (PPARγ) agonist troglitazone alters histone post-translational modifications in MCF7 breast cancer cells.

2009· article· en· W2048091229 on OpenAlexaff
G.F. Davies, AR Ross, BH Juurlink, HA Troy

Bibliographic record

VenueCancer Research · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Lipids, and Metabolism
Canadian institutionsPlant Biotechnology InstituteUniversity of Saskatchewan
Fundersnot available
KeywordsThiazolidinedioneCiglitazoneProtein kinase BHistone deacetylaseCancer researchAcetylationChemistryTroglitazonePI3K/AKT/mTOR pathwayPharmacologyHistone deacetylase inhibitorVorinostatHistoneBiologyPeroxisome proliferator-activated receptorEndocrinologyBiochemistryReceptorSignal transduction

Abstract

fetched live from OpenAlex

Abstract Abstract #2140 Troglitazone (TRG), a thiazolidinedione (TZD) PPARγ ligand, is a potent antiproliferative agent in many different cancer cell lines. We have previously demonstrated in multiple drug resistant (MDR) human K562 leukemia cells that TRG, in combination with the anthracycline antibiotic Doxorubicin (DOX), is an effective anticancer agent in MDR cells. The killing of drug resistant leukemia cells was accompanied by increased global histone H3 acetylation. In this report, we investigated the effects of TRG on both histone metabolism and killing of human MCF7 breast cancer cells. MCF7 cells were treated with TRG, as well as additional TZD's, such as Rosiglitazone, Ciglitazone and Pioglitazone. In all cases, a dose-dependent increase in H3K9 acetylation, total H2AX protein levels, and cell killing were noted. Striking similarities in histone modification profiles were also noted between TRG and histone deacetylase inhibitor (HDACi) treatment. A wide spectrum of common histone post-translational modifications (PTMs) were specifically induced by TRG and HDACi treatment, as determined by mass spectrometry. These findings suggested that TRG may possess HDACi activity. In support of this, in vitro HDACi activity assays showed TRG, but not other tested TZDs, possessed HDACi-like activity. Global H3K9 acetylation was also increased by inhibition of the PI3K/AKT pathway (but not the MEK/ERK pathway), raising the possibility that TRG and HDACi's may act via inhibition of AKT. Consistent with this idea, MCF7 cells treated with TRG or HDACi's exhibit reduced phosphorylated AKT. Our data supports a mechanistic model linking TRG with inhibition of histone de-acetylation in human breast cancer cells. Citation Information: Cancer Res 2009;69(2 Suppl):Abstract nr 2140.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.350
Teacher spread0.322 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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