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Record W2048690216 · doi:10.1371/journal.pone.0016756

The Obesity-Associated Polymorphisms FTO rs9939609 and MC4R rs17782313 and Endometrial Cancer Risk in Non-Hispanic White Women

2011· article· en· W2048690216 on OpenAlexafffund
Galina Lurie, Mia M. Gaudet, Amanda B. Spurdle, Michael E. Carney, Lynne R. Wilkens, Hannah Yang, Noel S. Weiss, Penelope M. Webb, Pamela J. Thompson, Keith Y. Terada, Veronica Wendy Setiawan, Timothy R. Rebbeck, Jennifer Prescott, Irene Orlow, Tracy A. O’Mara, Sara H. Olson, Steven A. Narod, Rayna K. Matsuno, Jolanta Lissowska, Xiaolin Liang, Douglas A. Levine, Loı̈c Le Marchand, Laurence N. Kolonel, Brian E. Henderson, Montserrat García‐Closas, Jennifer A. Doherty, Immaculata De Vivo, Chu Chen, Louise A. Brinton, Mohammad R. Akbari

Bibliographic record

VenuePLoS ONE · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer-related molecular mechanisms research
Canadian institutionsWomen's College HospitalUniversity of Toronto
FundersDivision of Cancer Epidemiology and Genetics, National Cancer InstituteNational Cancer InstituteCare and Public Health Research Institute, Universiteit MaastrichtNational Health and Medical Research CouncilCanadian Institutes of Health ResearchU.S. Public Health ServiceSchool of Medicine, Vanderbilt UniversitySchool of Medicine, New York UniversityNational Institutes of HealthUniversitätsklinikum ErlangenEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentKarolinska InstitutetUniversiteit MaastrichtVlaamse regeringVanderbilt-Ingram Cancer CenterUniversity of OxfordBrigham and Women's HospitalQueensland University of TechnologyRutgers Cancer Institute of New JerseyBarbara Ann Karmanos Cancer InstituteVanderbilt University Medical CenterYale Cancer CenterUniversity of Southern CaliforniaBeckman Research Institute, City of HopeUniversity of PittsburghMemorial Sloan-Kettering Cancer CenterUniversity of WashingtonJohns Hopkins UniversityCentre Hospitalier Universitaire VaudoisImperial College LondonYork UniversityAlberta Health ServicesCancer Institute, University of PittsburghUniversity of MinnesotaUniversity of PennsylvaniaUniversity of TorontoYale UniversityJohns Hopkins Bloomberg School of Public HealthVanderbilt UniversityUniversitetet i OsloWayne State UniversityU.S. Department of Health and Human Services
KeywordsEndometrial cancerMedicineObesityOverweightInternal medicineOdds ratioBody mass indexOncologyFTO geneGynecologyGenotypeEndocrinologyCancerPolymorphism (computer science)GeneticsBiology

Abstract

fetched live from OpenAlex

Overweight and obesity are strongly associated with endometrial cancer. Several independent genome-wide association studies recently identified two common polymorphisms, FTO rs9939609 and MC4R rs17782313, that are linked to increased body weight and obesity. We examined the association of FTO rs9939609 and MC4R rs17782313 with endometrial cancer risk in a pooled analysis of nine case-control studies within the Epidemiology of Endometrial Cancer Consortium (E2C2). This analysis included 3601 non-Hispanic white women with histologically-confirmed endometrial carcinoma and 5275 frequency-matched controls. Unconditional logistic regression models were used to assess the relation of FTO rs9939609 and MC4R rs17782313 genotypes to the risk of endometrial cancer. Among control women, both the FTO rs9939609 A and MC4R rs17782313 C alleles were associated with a 16% increased risk of being overweight (p = 0.001 and p = 0.004, respectively). In case-control analyses, carriers of the FTO rs9939609 AA genotype were at increased risk of endometrial carcinoma compared to women with the TT genotype [odds ratio (OR) = 1.17; 95% confidence interval (CI): 1.03-1.32, p = 0.01]. However, this association was no longer apparent after adjusting for body mass index (BMI), suggesting mediation of the gene-disease effect through body weight. The MC4R rs17782313 polymorphism was not related to endometrial cancer risk (per allele OR = 0.98; 95% CI: 0.91-1.06; p = 0.68). FTO rs9939609 is a susceptibility marker for white non-Hispanic women at higher risk of endometrial cancer. Although FTO rs9939609 alone might have limited clinical or public health significance for identifying women at high risk for endometrial cancer beyond that of excess body weight, further investigation of obesity-related genetic markers might help to identify the pathways that influence endometrial carcinogenesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.093
Threshold uncertainty score0.680

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.229
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations66
Published2011
Admission routes2
Has abstractyes

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