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Record W2050242332 · doi:10.1002/elps.201300357

Capillary electrophoresis‐mass spectrometry using a flow‐through microvial interface for cationic metabolome analysis

2013· article· en· W2050242332 on OpenAlexaff
Petrus W. Lindenburg, Rawi Ramautar, Roxana Jayo, David D. Y. Chen, Thomas Hankemeier

Bibliographic record

VenueElectrophoresis · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsMetabolomeMetabolomicsChemistryChromatographyCapillary electrophoresisCapillary electrophoresis–mass spectrometryMetaboliteMass spectrometryCationic polymerizationAnalytical Chemistry (journal)DilutionElectrospray ionizationBiochemistry

Abstract

fetched live from OpenAlex

The application of CE-MS in the field of metabolomics is underrepresented, even though it is in principle highly suited for the analysis of small charged compounds, as many metabolites are. Moreover, a robust coupling, using the sheath liquid (SL)-assisted interface was already presented more than a decade ago. A lack of concentration sensitivity is often mentioned as a reason for the underrepresentation of CE-MS in metabolomics. This is caused by postcolumn dilution of the sample with SL, which is typically delivered at a flow rate of 1-10 μL/min. In this study, we investigated the performance of the flow-through microvial (MV) assisted CE-MS interface for cationic metabolomics. With this interface, only a little liquid is added postcolumn, that is, typically 100-500 nL/min. For the evaluation, we used a metabolite mix comprising 45 important cationic metabolites and compared the sensitivity and LOD of both devices. The performance of the CE-MS system was significantly improved by using the MV-assisted interface; the sensitivity was increased more than three times and the LOD decreased more than five times. Then, we analyzed single zebrafish embryos to demonstrate the method on a volume-limited biological sample. In comparison with SL-assisted CE-MS, twice as many molecular features were found, of which several could be identified. These results demonstrate the good potential of the MV interface for enhancing the coverage of the metabolome.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.087
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.260
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations38
Published2013
Admission routes1
Has abstractyes

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