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Record W2051730553 · doi:10.1094/pdis-94-2-0277a

First Report of <i>Waitea circinata</i> from Turfgrass in British Columbia, Canada

2010· article· en· W2051730553 on OpenAlexaffabout
Karla de la Cerda, Tom Hsiang, V. K. Joshi

Bibliographic record

VenuePlant Disease · 2010
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Disease Resistance and Genetics
Canadian institutionsMinistry of AgricultureGovernment of British ColumbiaUniversity of Guelph
Fundersnot available
KeywordsAgrostis stoloniferaBiologyPotato dextrose agarBotanyInoculationPoa annuaHorticultureRhizoctonia solaniInternal transcribed spacerRibosomal DNAAgarPoaceaeRibosomal RNA

Abstract

fetched live from OpenAlex

In Canada, Waitea circinata was first identified from buckwheat (Fagopyrum sp.) in 1965 in Ontario (4). In 2004, the fungus was found on diseased putting greens of Poa annua and Agrostis stolonifera near Toronto, Ontario (2). In late July 2009, symptoms on A. stolonifera resembling those of brown ring patch were seen at a golf course in Kelowna, British Columbia. Brown rings with light-colored, cottony growth were observed on a putting green with mixed P. annua and A. stolonifera, originally seeded with A. stolonifera cv. Penncross. Following a short incubation of the diseased grass at 25°C, hyphae of a Rhizoctonia-like fungus, not matching the characteristics of R. cerealis or R. solani, were seen. Symptomatic leaves were surface sterilized in 1% hypochlorite and plated onto potato dextrose agar (PDA) amended with streptomycin. After 1 week at 23°C, the plates contained white colonies that were 5 cm across. DNA was extracted and amplified with primers ITS1/ITS4 and sequenced with ITS1. The 600-bp sequence (deposited in GenBank as GU176409) from the internal transcribed spacer (ITS) region of ribosomal DNA showed a 100% match in the overlapping range with sequence FJ755879 from GenBank, which is annotated as W. circinata var. circinata. Pathogenicity was tested at 23°C by inoculating 3-week-old A. stolonifera 'Penncross' plants grown in Magenta boxes and incubated for 15 days after inoculation with ground wheat seed inoculum of W. circinata. Within 1 week, significant blighting of leaves and sheaths was observed as well as spherical orange brown sclerotia that were 2 to 5 mm in diameter on sheaths. These sclerotial features match characteristics of W. circinata var. circinata (1). Symptomatic leaves were plated on PDA and fungal growth characteristic of W. circinata was recovered. W. circinata was previously reported as the causal agent of brown ring patch on A. stolonifera in Japan (3), as a pathogen of P. annua in the United States (1), and as a pathogen of both species in Ontario, Canada (2). To our knowledge, this is the first report of W. circinata from turfgrass in western Canada. References: (1) C. M. Chen et al. Plant Dis. 93:906. 2009. (2) T. Hsiang and P. Masilamany. Plant Pathol. J. 56:350, 2007. (3) T. Toda et al. Plant. Dis. 89:536, 2005. (4) O. Vaartaja. Bi-Mon. Progr. Rep. Can. Dep. For. 21(5):2. 1965.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.044
Threshold uncertainty score0.088

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0030.003
Science and technology studies0.0060.001
Scholarly communication0.0020.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.156
Teacher spread0.152 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2010
Admission routes2
Has abstractyes

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