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Record W2053617289 · doi:10.1007/s00344-008-9056-5

Identification of Differentially Expressed Genes in Brassinosteroid-Treated Brassica napus Seedlings

2008· article· en· W2053617289 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueJournal of Plant Growth Regulation · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Stress Responses and Tolerance
Canadian institutionsWestern University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBrassinosteroidBiologyBrassicaThiolaseSiliqueGeneArabidopsis thalianaArabidopsisGeneticsPlant physiologyTranscription factorGene expressionBotanyBiochemistryPeroxisomeMutant

Abstract

fetched live from OpenAlex

Brassinosteroid-mediated gene expression changes have been reported primarily in Arabidopsis thaliana but not in its close relative Brassica napus . To obtain an initial idea of the molecular changes induced by long-term exposure to 24-epibrassinolide (EBR) in B. napus seedlings, we used the differential display–reverse transcription PCR technique. Six differentially expressed cDNAs were isolated and characterized. These encode a mitochondrial transcription termination factor (mTERF)-related protein, glycine-rich protein 22 (GRP22), myrosinase, 3-ketoacyl-CoA thiolase, and a copia-like polyprotein. The first four were upregulated in EBR-treated seedlings while the latter was expressed at higher levels in untreated seedlings. Transcripts of mTERF-related protein, GRP22, and myrosinase were present at higher levels in treated seedlings under nonstress conditions, whereas those of 3-ketoacyl-CoA thiolase rose to higher levels in treated seedlings during exposure to heat stress. The results of the present study indicate that EBR treatment in B. napus leads to substantial changes in the expression levels of genes involved in a variety of physiologic responses. The results provide a useful framework for further research into EBR-mediated molecular changes in B. napus , which will also add to our understanding of how brassinosteroids mediate stress tolerance in this agriculturally important oil crop.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.678
Threshold uncertainty score0.167

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.205
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it