MétaCan
Menu
Back to cohort

Transgenic expression of a viral EPS‐depolymerase is potentially useful to induce fire blight resistance in apple

2008· article· en· W2055433038 on OpenAlex
Henryk Flachowsky, Klaus Richter, Whee-Soo Kim, Klaus Geider, Magda‐Viola Hanke

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueAnnals of Applied Biology · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsNorgen Biotek Corporation (Canada)
Fundersnot available
KeywordsBiologyFire blightErwiniaTransformation (genetics)TransgeneAgrobacterium tumefaciensAgrobacteriumGenetically modified cropsMicrobiologyPlant disease resistanceGeneMarker geneBotanyMolecular biologyGenetics

Abstract

fetched live from OpenAlex

Abstract Fire blight caused by Erwinia amylovora is the most destructive bacterial disease of pear and apple. The goal of this research was to improve fire blight resistance of apple by transformation with a gene encoding for an extracellular polysaccharide (EPS)‐depolymerase from the E. amylovora phage phi‐Ea1h. The EPS‐depolymerase gene ( dpo ) driven by the constitutive promoter CaMV35S was transferred into apple scion cv. ‘Pinova’ through Agrobacterium tumefaciens ‐mediated leaf disk transformation using a binary vector and strains EHA105 or LBA4404. The integration of the dpo gene and the marker gene nptII was confirmed by polymerase chain reaction (PCR) and by Southern hybridisation. From 4560 leaves inoculated in 23 different transformation experiments, 33 independent shoots, regenerated from a single transformation event, were identified as transgenic. Nine of the shoots were randomly selected and vegetatively propagated to establish transgenic clones. The transgenic clones were diploid as was the non‐transgenic genotype ‘Pinova’ analysed by flow cytometry. Both transgenes ( dpo and nptII ) were transcriptionally active determined by reverse transcription (RT)‐PCR and quantitative RT‐PCR. EPS‐depolymerase was expressed in all transgenic clones showing substantial differences in its activity for different clones concerning EPS degradation. Resistance to E. amylovora was evaluated by infection of in vitro leaves as well as by artificial shoot inoculation of ex vitro plants in the greenhouse. No correlation was obtained for the transgenic lines between the level of dpo gene expression and both the level of depolymerase activity and the disease resistance in vitro , whereas, depolymerase activity did correlate positively with resistance to fire blight in vitro . Seven clones had less disease than the non‐transformed genotype when measured in greenhouse, but no statistically significant differences were found, except for line T373. One line showed the highest depolymerase activity and the least susceptibility to fire blight in vitro as well as in greenhouse (T187).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.021
Threshold uncertainty score0.260

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.074
GPT teacher head0.297
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it