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Black stain root disease progression in coastal Douglas-fir in British Columbia

2008· article· en· W2057241119 on OpenAlexaffvenueabout
William R. Jacobi, Stefan Zeglen, Jeffrey D. Beale

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsGovernment of British Columbia
Fundersnot available
KeywordsCrown (dentistry)Incidence (geometry)BiologyStainMortality rateBotanyDouglas firHorticultureMedicineStainingSurgeryDentistryMathematics

Abstract

fetched live from OpenAlex

Periodic monitoring of black stain root disease (Leptographium wageneri var. pseudotsugae) in coastal Douglas-fir (Pseudotsuga menziesii) on Vancouver Island and mainland British Columbia, Canada, provided intensification and mortality rates for this disease. Fifteen plots with Douglas-firs of varying ages and sizes and growing on sites with different conditions were established in 1989 and assessed in 1994 and 2000. Overall mortality from black stain root disease increased from 11.4% in 1989 to 19.0% in 2000, or 0.7% per year. A further 6.5% of trees succumbed to other root diseases and 9.4% to unknown causes but most likely black stain root disease. When trees were placed in three diameter classes, there were no significant differences in disease incidence among size classes or over time. Based on plot-level data, the incidence of disease increased with an increase in elevation (P < 0.09) and with an increase in slope (P < 0.08). Mean tree age and aspect were not significantly related to disease incidence. Crown condition rating of trees within the black stain root disease centers was a good predictor of future mortality and further disease progression. Trees with crown condition classes of slightly yellow foliage, moderately yellow foliage, totally yellow foliage, and >50% defoliated in 1989 died at a higher rate as crown condition deteriorated with 26%, 45%, 64%, and 77% tree mortality, respectively, by 2000.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.171
Threshold uncertainty score0.343

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.205
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2008
Admission routes3
Has abstractyes

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