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Record W2060661229 · doi:10.7872/crya.v36.iss1.2015.81

Comparison of Lichen-Forming Cyanobacterial and Green Algal Photobionts with Free-Living Algae

2015· article· en· W2060661229 on OpenAlexafffund
Mostafa E. Elshobary, Mohamed E. Osman, Atef M. Abushady, Michele D. Piercey‐Normore

Bibliographic record

VenueCryptogamie Algologie · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsNostocBiologyLichenCyanobacteriaBotanyAlgaeGreen algaeBacteriaGenetics

Abstract

fetched live from OpenAlex

Cyanobacteria of the genus Nostoc and green algae in the Chlorophyceae are widespread in nature and may occur in symbiotic associations with lichen-forming ascomycetes or as free-living cyanobacteria. Recent findings for some groups of lichens suggest that special lichen-forming photobiont lineages may exist independent of the free-living lineages, but few comparisons on photobiont growth, pigment, and polysaccharide production have been made. The goal of this study was to isolate photobionts, confirm their identity, and characterize their growth, pigment and polysaccharide production relative to free-living lineages. Algal growth, pigment contents, and polysaccharide concentration was measured using standard methods. The identification of Nostoc species was determined using transfer RNA for Leucine (trnL) nucleotide sequences and green algae using the internal transcribed spacer 1 of ribosomal DNA (ITS rDNA) sequences. An additional heptanucleotide repeat was present in the trnL gene of the Nostoc strain that associates with Leptogium rivulare. The biomass of pigment and polysaccharide production was highest in the lichenized Diplosphaera chodatii but the specific growth rate was highest in the free-living green alga, Chlorella vulgaris. The specific growth of the free-living Nostoc was higher than the lichenized Nostoc but pigment production was similar and polysaccharide production was lower than some of the lichenized Nostoc isolates. It was further hypothesized that the rates of growth, polysaccharide and pigment production may be key factors in compatibility of lichen algae with the fungus.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.060
GPT teacher head0.274
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2015
Admission routes2
Has abstractyes

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