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Record W2062374078 · doi:10.1111/pbr.12049

Gene expression profiles during embryo development in <i>Brassica napus</i>

2013· article· en· W2062374078 on OpenAlex
Prakash Venglat, Daoquan Xiang, Hui Yang, Lianglu Wan, Chabane Tibiche, Andrew R. S. Ross, Edwin Wang, Gopalan Selvaraj, Raju Datla

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenuePlant Breeding · 2013
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsBiotechnology Research InstitutePlant Biotechnology Institute
FundersNational Research Council CanadaGenome CanadaGenome PrairieGenomic Health
KeywordsBiologyEndospermEmbryoZygoteCanolaBrassicaEmbryogenesisGeneticsGeneProteomeCotyledonTranscriptomeGene expressionBotanyCell biology

Abstract

fetched live from OpenAlex

Abstract The seed in angiosperms is produced through coordinated development of the embryo, endosperm and seed coat. In dicots, most of the seed mass is taken up by the embryo with nutritional reserves stored in the cotyledons. During embryogenesis, well‐coordinated developmental and genetic programmes establish the embryonic body plan, and the associated complex metabolic pathways result in the production of diverse nutrients and deposition of important seed storage reserves. To gain insights into the genetic programmes that operate during embryo development in B rassica napus L. (canola), an important oilseed crop, we performed gene and protein expression analyses. We used the key stages from single‐cell zygote to mature embryo to generate comprehensive EST and proteome data sets. Analysis of these data sets identified 20 183 genes and 2607 proteins that are differentially expressed across different stages of embryo development. B . napus genes share high degree of homology with A rabidopsis and display stage‐specific and shared expression patterns associated with developmental and metabolic pathways. Together, this study has generated useful new molecular and genomic resources for embryo development in B . napus .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.208
Threshold uncertainty score0.232

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.211
Teacher spread0.185 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it