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Record W2062457700 · doi:10.1139/b08-070

Molecular phylogeny of the North American eurybioid asters (Asteraceae, Astereae) based on the nuclear ribosomal internal and external transcribed spacersThis paper is one of a selection of papers published in the Special Issue on Systematics Research.

2008· article· en· W2062457700 on OpenAlexaffvenue
Sugirthini Selliah, Luc Brouillet

Bibliographic record

VenueBotany · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSesquiterpenes and Asteraceae Studies
Canadian institutionsUniversité de Sherbrooke
Fundersnot available
KeywordsBiologyMonophylyParaphylyBotanyCladeTaxonSister groupInternal transcribed spacerCharacter evolutionZoologyEvolutionary biologyPhylogenetic treeGenetics

Abstract

fetched live from OpenAlex

The eurybioid asters Oreostemma , Herrickia , Eurybia , and Triniteurybia form a complex that is part of the North American clade of tribe Astereae. They comprise 31 species of perennial herbs that are widely distributed on the continent. Previous analyses had shown poor resolution among the four genera and among the species, particularly within Eurybia (23 spp.), which includes diploids and polyploids. We investigated phylogenetic relationships within the group using the nuclear ribosomal ITS and ETS regions, in separate and combined parsimony and Bayesian analyses. We detected incongruence between the ITS and ETS regions when polyploids were included, and so only diploids were considered in the combined analyses. Eurybia pygmaea (Lindl.) G.L. Nesom is confirmed as a member of Symphyotrichum ; Eurybia is monophyletic once this species is re-classified. The eurybioids form a paraphyletic grade with Oreostemma, sister to the remaining taxa, followed in succession by Herrickia , Eurybia , and Triniteurybia , and with the latter genus sister to subtribe Machaerantherinae. Thus the xeric Machaerantherinae (x = 6, 5, 4) is nested within the grade of mesic eurybioids (x = 9). Although largely grouping together, the polyploid taxa of Eurybia apparently do not constitute a clade and their relationships to the diploid taxa and to each other could not be assessed further. Among the diploids, two clades emerge: one including the western Eurybia integrifolia (Nutt.) G.L. Nesom and Eurybia sibirica (L.) G.L. Nesom, and the southeastern Eurybia eryngiifolia (Torr. & A. Gray) G.L. Nesom; and a second including the western Eurybia radulina (A. Gray) G.L. Nesom, the eastern cordate-leaved (sect. Eurybia) and the narrow-leaved, mostly coastal plain species of Eurybia. Our analyses, therefore, do not support the current classifications of Eurybia.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.755
Threshold uncertainty score0.423

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.249
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2008
Admission routes2
Has abstractyes

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