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Record W2063061758 · doi:10.1021/jf1003545

Using DRIFT Molecular Spectroscopy with Uni- and Multivariate Spectral Techniques To Detect Protein Molecular Structure Differences among Different Genotypes of Barley

2010· article· en· W2063061758 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueJournal of Agricultural and Food Chemistry · 2010
Typearticle
Languageen
FieldChemistry
TopicSpectroscopy and Chemometric Analyses
Canadian institutionsUniversity of Saskatchewan
FundersNational Institute of Biomedical Imaging and BioengineeringCenters for Disease Control and PreventionUniversity of Saskatchewan
KeywordsMultivariate statisticsMultivariate analysisGenotypeSpectroscopyBiologyChemistryGeneticsGeneMathematicsStatisticsPhysics

Abstract

fetched live from OpenAlex

The objectives of this study were to characterize protein molecular structure using DRIFT spectroscopy with univariate and multivariate molecular spectral analyses and identify the structure differences in both hull and seeds among six spring barley varieties [AC Metcalfe (malting-type), CDC Dolly (feed-type, spring forage type), McLeod (feed-type), CDC Helgason (feed-type), CDC Trey (feed-type), CDC Cowboy (feed-type)]. The molecular structure spectral analyses involved protein amide I and II region ca. 1716-1485 cm(-1) (attributed to protein amide I C=O and C-N stretching; amide II N-H bending and C-N stretching) together with agglomerative hierarchical cluster (CLA) and principal component analyses (PCA). The results showed that the molecular spectral techniques were able to identify spectral differences associated with the molecular structural differences among the barley varieties. The molecular spectral analyses at the region of ca. 1715-1485 cm(-1) together with the cluster and principal component analyses were able to show that the molecular structures of the seeds (NOT hull) exhibited distinguished differences among the barley varieties. It was found that CDC Helgason had the distinguished differences from AC Metcalfe, McLeod, and CDC Cowboy in both protein amide I and II. The molecular spectral technique provides a new approach for plant protein molecular structure and biopolymer conformation study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.022
Threshold uncertainty score0.810

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.221
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it