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Record W2063536545 · doi:10.3114/sim.53.1.75

Profiles from Biolog FF plates and morphological characteristics support the recognition of Oidiodendron fimicola sp. nov.

2005· article· en· W2063536545 on OpenAlex
Adrianne V. Rice, Randolph S. Currah

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueStudies in Mycology · 2005
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsBiologyBotany

Abstract

fetched live from OpenAlex

Abstract Oidiodendron fimicola sp. nov., represented by two collections from mushroom compost, is distinct from other species in the genus in having scaly conidiophores and asperulate, hyaline to melanized, barrel-shaped to irregular conidia. By light microscopy, it most closely resembles Oidiodendron flavum; by scanning electron microscopy the two species can be clearly distinguished based on perispore morphology and on the formation of distinctive scale-like protrusions on conidiophores of O. fimicola. We were unable to obtain DNA from O. fimicola despite repeated attempts. As a result, we investigated the use of Biolog profiles as a source of taxonomic characters for delimiting the new species among a selection of related taxa. Biolog FF profiles for 42 isolates, representing 19 species of Oidiodendron and Myxotrichum, were analysed using cluster analyses in PC-ORD. Because the reliability of Biolog FF kits with Oidiodendron species has not previously been assayed, multiple replicate tests were done for some isolates. Each of the resulting 54 data sets was unique; that is to say, variation occurred among isolates of the same species and in replicate trials of individual isolates, in addition to being seen in connection with differences among species. Despite this degree of test variability, it was possible to reliably distinguish O. fimicola, O. rhodogenum, O. truncatum, and most isolates of O. maius and O. periconioides with Biolog FF profiles. Four isolates of an as yet undescribed species of Oidiodendron also gave consistent profiles supporting their conspecificity. Taxonomic novelties: Oidiodendron fimicola Rice & Currah sp. nov.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.827
Threshold uncertainty score0.332

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.283
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it