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Record W2066844183 · doi:10.1080/00028487.2014.880734

Differentiation of Sympatric Arctic Char Morphotypes Using Major Histocompatibility Class II Genes

2014· article· en· W2066844183 on OpenAlexafffundabout
Pablo Conejeros, Anna Phan, Michael Power, Michael O’Connell, S. S. Alekseyev, Iván Salinas, Brian Dixon

Bibliographic record

VenueTransactions of the American Fisheries Society · 2014
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsFisheries and Oceans CanadaUniversity of Waterloo
FundersFisheries and Oceans CanadaRussian Foundation for Basic Research
KeywordsSympatric speciationBiologyArctic charEcologyArcticPhenotypic plasticitySalvelinusAdaptation (eye)Local adaptationHabitatSympatryEcotypeEcological nicheNichePopulation

Abstract

fetched live from OpenAlex

Abstract Arctic CharSalvelinus alpinushave colonized northern postglacial lakes within the last few thousand years. Divergent populations have adapted to thrive in the prevailing oligotrophic environments and thus have developed morphotypes with different ecological behaviors. The morphotypes usually differ in size, morphology, coloration, feeding ecology, and/or habitat occupancy. Although morphotypes that have very divergent spawning seasons should become genetically segregated, genetic differentiation, in most cases, has been weak. Thus, results to date have suggested that Arctic Char morphotype separation has been driven largely by the environmentally mediated phenotypic plasticity of the species, with differentiation between morphotypes having commenced too recently to generate substantial genetic drift. Here we used the major histocompatibility (MH) class II genes in an attempt to isolate sympatric Arctic Char morphotypes known to be ecologically differentiated. These morphotypes are from postglacial lakes in both Siberia and eastern Canada, and differ in either diet, habitat occupancy, or both. The MH Class II allelic polymorphism was significantly different between morphotypes. This suggested there is differential heritable adaptation to the natural selection exerted by pathogens unique to each ecological niche within each lake.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.208
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2014
Admission routes3
Has abstractyes

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Same venueTransactions of the American Fisheries SocietySame topicFish Ecology and Management StudiesFrench-language works237,207