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Record W2067269486 · doi:10.1071/en11033

1-D and 2-D NMR metabolomics of earthworm responses to sub-lethal trifluralin and endosulfan exposure

2011· article· en· W2067269486 on OpenAlexaff
Jimmy Yuk, Myrna J. Simpson, André J. Simpson

Bibliographic record

VenueEnvironmental Chemistry · 2011
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental Toxicology and Ecotoxicology
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsEisenia fetidaEndosulfanChemistryMetabolomicsPesticideEnvironmental chemistryValineTrifluralinGlycineMetabolic pathwayBiochemistryMetabolismToxicityChromatographyAmino acidBiologyOrganic chemistryEcology

Abstract

fetched live from OpenAlex

Environmental context Environmental metabolomics is an emerging field that examines the metabolic changes in organisms in response to potential environmental stressors. In this study, nuclear magnetic resonance spectroscopy is used to investigate earthworm metabolic responses to sub-lethal exposure of environmentally persistent pesticides. The study identifies two toxic modes of action elicited by the pesticides, and highlights the potential of metabolomics for the chemical assessment of persistent environmental contaminants. Abstract 1-D and 2-D nuclear magnetic resonance (NMR) spectroscopy is used to examine the metabolic response of the earthworm (Eisenia fetida) after contact test exposure to an organofluorine pesticide, trifluralin, and an organochlorine pesticide, endosulfan. Three sub-lethal concentrations were used for each pesticide (0.1, 0.5 and 1.0 mg cm–2 for trifluralin and 0.5, 1.0 and 2.0 μg cm–2 for endosulfan). Principal component analysis of the trifluralin and endosulfan NMR datasets showed separation between the unexposed and the exposed earthworm groups. Alanine, glycine, maltose and ATP were significant in the highest concentration (1.0 mg cm–2) for trifluralin-exposed earthworms and may result from a non-polar narcosis toxic mode of action (MOA). Leucine, phenylalanine, tryptophan, lysine, glutamate, valine, glycine, isoleucine, methionine, glutamine, alanine, maltose, glucose, meibiose, malate, fumarate and ATP were detected as significant for the two highest concentrations (1.0 and 2.0 μg cm–2) for endosulfan-exposed earthworms and a neurotoxic MOA is postulated. This study highlights the use of 1-D and 2-D metabolomics for understanding the biochemical response of environmental contaminants to model organisms such as earthworms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.191
Teacher spread0.180 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2011
Admission routes1
Has abstractyes

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