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Record W2068412391 · doi:10.2135/cropsci2014.01.0080

Mapping QTL, Selection Differentials, and the Effect of <i>Rht‐B1</i> under Organic and Conventionally Managed Systems in the Attila × CDC Go Spring Wheat Mapping Population

2015· article· en· W2068412391 on OpenAlexafffundabout
Muhammad Asif, Rong‐Cai Yang, Alireza Navabi, Muhammad Iqbal, A. Kamran, Enid Perez Lara, Harpinder Randhawa, Curtis Pozniak, Dean Spaner

Bibliographic record

VenueCrop Science · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food CanadaAgriculture Food and Rural DevelopmentUniversity of SaskatchewanUniversity of GuelphUniversity of Alberta
FundersGenome PrairieAlberta InnovatesAgriculture and Agri-Food CanadaWestern Grains Research FoundationUniversity of AlbertaNatural Sciences and Engineering Research Council of CanadaMinistry of Agriculture - SaskatchewanGenome CanadaGenome AlbertaAlberta Crop Industry Development Fund
KeywordsBiologyDwarfingQuantitative trait locusAgronomyPopulationHeritabilitySelection (genetic algorithm)CultivarTraitTest weightAlleleHorticultureGenetics

Abstract

fetched live from OpenAlex

ABSTRACT A randomly derived recombinant inbred line (RIL) population ( n = 163) from a cross between CIMMYT spring wheat ‘Attila’ and the Canadian ‘CDC Go’ was used to map quantitative trait loci (QTL) affecting various agronomic and quality traits. The experiment was also designed to investigate the feasibility of organic wheat breeding by determining selection differentials and the effect of Rht‐B1 in paired organic and conventional management systems. Heritability estimates differed between systems for five of nine traits measured; including grain yield, number of tillers, plant height, kernel weight, and grain protein content. Direct selection in each management system resulted in 50% or fewer selected individuals in common between the two systems, for eight of the nine (except for flowering time) studied traits. Most QTL were specific to either the organic or the conventional management system. However, consistent QTL for grain yield, grain volume weight, kernel weight, and days to flowering were mapped in both systems on chromosomes 6A, 1B, 3A, and 5B, respectively. The effect of Rht‐B1 was more pronounced in organic systems, where RILs carrying the wild‐type allele were taller, produced more grain yield with higher grain protein content, and suppressed weed biomass to a greater extent than those carrying dwarfing alleles. Results of the present study suggest that differences exist between the two management systems for QTL effects. Indirect selection of superior genotypes from one system to another will not result in the advancement of the best possible genotypes. Therefore, selection of spring wheat cultivars for organic systems should be conducted on organically managed lands.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.805
Threshold uncertainty score0.222

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.224
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations31
Published2015
Admission routes3
Has abstractyes

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