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Record W2069650462 · doi:10.4141/cjps07145

Identification of anthracnose resistance genes in dry bean cultivars grown in Manitoba

2008· article· en· W2069650462 on OpenAlexafffundvenueabout
R. L. Conner, Kangfu Yu, Parthiba Balasubramanian, Waldo C. Penner, L. M. Yager

Bibliographic record

VenueCanadian Journal of Plant Science · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant pathogens and resistance mechanisms
Canadian institutionsUniversity of LethbridgeAgriculture and Agri-Food Canada
FundersAgriculture and Agri-Food CanadaCollege of Engineering, Michigan State UniversityMichigan State University
KeywordsCultivarPhaseolusColletotrichum lindemuthianumBiologyDry beanPinto beanGenotypeRAPDHorticultureGene poolGeneResistance (ecology)BotanyGenetic diversityAgronomyGeneticsPopulation

Abstract

fetched live from OpenAlex

Previously described random amplified polymorphic DNA (RAPD) and sequence characterized amplified region (SCAR) markers were used to identify specific genes for anthracnose resistance in 20 dry bean (Phaseolus vulgaris) cultivars and one breeding line. These included six navy bean, five black bean, three kidney bean, two great northern bean, two pinto bean, one cranberry bean, one pink bean and one small red bean cultivars. The reactions of these bean cultivars to five races (i.e., races 23, 31, 73, 81, 105) of Colletotrichum lindemuthianum were used to verify the results of the molecular marker tests. The combined analysis of genotypes estimated with markers and race reactions showed that navy bean cultivar Envoy carried gene Co-1 2 , possibly in combination with other resistance genes, which conferred resistance to all the races except race 105. The bean cultivars Morden003, Messina and CDC Nordic carried Co-1 5 , which provided resistance to only races 73 and 105. Resistance in AC Mariner appeared to be controlled by gene Co-2 either alone or possibly in combination with Co-11. The kidney bean cultivars Chardonnay and ROG 802 carried resistance gene Co-1. Eight other cultivars were resistant to races 23 and 31, which indicated that they carried resistance gene Co-3 or another unidentified resistance gene. Six dry bean cultivars were susceptible to all five anthracnose races. Genotype estimates were based primarily on the virulence pattern of the races on specific cultivars. The results from the molecular tests sometimes supported the proposed genotypes based on the results from the race inoculations, but false positive results often occurred with molecular markers for genes Co-2 and Co-4. Virulence pattern information allowed the detection of specific resistance genes in certain cultivars, but did not always rule out the presence of other genes. Key words: Disease resistance, gene identification, anthracnose (Colletotrichum lindemuthianum), dry bean (Phaseolus vulgaris), molecular marker

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.872
Threshold uncertainty score0.579

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.198
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2008
Admission routes4
Has abstractyes

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