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Record W2073588256 · doi:10.2307/2666642

Isozymes of the Isoetes riparia Complex, II. Ancestry and Relationships of Polyploids

2000· article· en· W2073588256 on OpenAlex
Cynthia A. Caplen, Charles R. Werth

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueSystematic Botany · 2000
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyBotanyTaxonomy (biology)IsozymeZoology

Abstract

fetched live from OpenAlex

Abstract Isoetes riparia is a complex tetraploid taxon of eastern North America that in its widest sense includes a diversity of morphotypes variously segregated, or included in a single polymorphic species. Although the diploid ancestry of I. riparia has been proposed as I. echinospora × engelmannii, it is uncertain whether this ancestry applies to all elements of the complex, here broadly defined to encompass three segregates of I. riparia and the recently described I. hyemalis (referred to informally as riparia, canadensis, saccharata and hyemalis). To help clarify relationships among these tetraploids, isozyme genotypes for 13 loci coding eight enzymes, were determined for 16 populations representing all four segregates. Duplicate gene expression, evidenced as fixed heterozygosity consistent with allopolyploidy, characterized the tetraploid genotypes of all taxa. Although exhibiting modest to no variation within populations, populations were highly differentiated, most showing a unique combination of alleles for their multilocus genotypes, with the exception of five genetically identical Canadian populations. Ancestry was evaluated through comparison to diploid genotypes previously reported. A quantitative approach was carried out to rank likelihoods for hypothetical ancestral combinations of diploids for each tetraploid population. The ancestry I. echinospora × engelmannii hypothesized for I. riparia was unequivocally supported for the six populations of the most northern segregate, canadensis. Diploid ancestries for the remaining 10 more southern populations were less certain, although the diploid I. mattaponi was implicated as a likely ancestor for most. Most likely ancestry for populations of riparia/saccharata was inferred as I. valida × mattaponi, and for hyemalis as I. mattaponi × flaccida. However, these hypotheses were only slightly more likely than other combinations. UPGMA analysis using Rogers' similarity resulted in three clusters corresponding to canadensis, riparia/saccharata, and hyemalis. However, the hyemalis cluster was weakly associated and was not supported by UPGMA using Nei's identity. These highly variable tetraploid genotypes suggest a complicated evolutionary history for the I. riparia complex that probably involved a combination of diverse ancestry, multiple origins, divergence, and gene silencing. Communicating Editor: Anita Cholewa

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.472
Threshold uncertainty score0.212

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.236
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it