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Record W2075814595 · doi:10.1186/1741-7007-11-51

Q&A: Antibiotic resistance: what more do we know and what more can we do?

2013· article· en· W2075814595 on OpenAlexafffundabout
Gerard D. Wright

Bibliographic record

VenueBMC Biology · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAntibiotic Resistance in Bacteria
Canadian institutionsMcMaster University
FundersCanadian Institutes of Health Research
KeywordsBiologyAntibiotic resistanceAntibioticsResistance (ecology)MicrobiologyComputational biologyEcology

Abstract

fetched live from OpenAlex

Is the problem of antibiotic resistance getting worse? Yes. Resistance to antibiotics continues to be a significant and growing medical problem across the globe. In the US, the Centers for Disease Control recently released a report showing that infections due to carbapenemresistant Enterobacteriaceae (CRE), which are associated with mortality rates between 40% and 50%, rose from 1.2% to 4.2% over the decade from 2001 to 2011 [1]. In the clinically important Klebsiella subset of these pathogens, the rise over the same time period was from 1.6% to 10.4%. Carbapenems are among the last resort antibiotics we have to treat infections of Gramnegative bacteria and this steady erosion of their efficacy is especially concerning. The cause is the spread of genes that encode enzymes that destroy these antibiotics, in particular KPC (Klebsiella pneumoniae carbapenemase) and NDM (New Delhi metallo-betalactamase) [2]. The latter has been found widespread in the environment, including the water supply on the Indian subcontinent [3]. Infections due to multidrug resistant Neisseria gonorrhea are also on the rise. Once easily treated with available antibiotics, the emergence of drug-resistant strains resulting in clinical failures is becoming more common. A recent study in a Toronto clinic showed that 6.77% of cases could not be cured with standard oral antibiotic therapy [4]. Outbreaks of infections caused by multidrug and sometimes pan-resistant epidemic clones of Acinetobacter baumannii are increasingly reported in health care settings across the globe. The establishment of methicillin-resistant Staphylococcus aureus (MRSA) in the community at large as well as in hospitals is continuing; over 460,000 MRSA infections required hospitalization in the US in 2009 [5]. There are now circulating

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.773
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.272
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2013
Admission routes3
Has abstractyes

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