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Record W2080185046 · doi:10.1039/b918291h

Microfluidic devices for cell based high throughput screening

2009· article· en· W2080185046 on OpenAlexafffund
Sarvesh Upadhyaya, P. Ravi Selvaganapathy

Bibliographic record

VenueLab on a Chip · 2009
Typearticle
Languageen
FieldEngineering
Topic3D Printing in Biomedical Research
Canadian institutionsMcMaster University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsMicrofluidicsThroughputHigh-throughput screeningNanotechnologyComputer scienceComputational biologyEngineeringBiologyMaterials scienceBioinformaticsTelecommunications

Abstract

fetched live from OpenAlex

Cell based screening assays are increasingly used in drug discovery due to the physiological significance of the results and high content information obtained from them. Miniaturization of this format, currently carried out in microwell plates, is at its limit due to increased unnatural interaction of cells with walls inside micro-wells. In order to overcome this limitation, we present a new format for dynamically controlled, precise, spatial and temporal dosing of a continuous cell culture layer, using microfluidics. The device consists of a micropatterned nanoporous membrane layer that allows specific spatial locations in the continuous gel layer above, to be chemically addressed by external electric field through a microfluidic network below it. We demonstrate that the control of electric field across the nanoporous membrane leads to extremely precise dosing (approximately 50 microg accuracy). Spot sizes of 200 microm to 6 mm in diameter and inter-spot distances of 0.4-10 mm have been obtained. Microarray spot densities of 156 spots/cm(2) were obtained, which is five times higher than the densities used in current cell based assays. The capability of this method in handling small molecules, proteins and drugs is also demonstrated. This format of spatial dosing of continuous cell culture will enable further miniaturization of cell based assays and aid in high-throughput high-content screening.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.007
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.274
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations47
Published2009
Admission routes2
Has abstractyes

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