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Record W2081529227 · doi:10.1118/1.3613555

TH‐C‐220‐12: Biochemical Radiation Response of Irradiated Human Tumour Cells Observed via Raman Spectroscopy

2011· article· en· W2081529227 on OpenAlexaff
Quinn Matthews, Andrew Jirasek, AG Brolo, Julian J. Lum

Bibliographic record

VenueMedical Physics · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsSimon Fraser UniversityBC Cancer Agency
Fundersnot available
KeywordsDU145RadiosensitivityLNCaPIrradiationRaman spectroscopyRadioresistanceBiodosimetryCell cultureNuclear medicineChemistryBiologyProstate cancerMedicineOpticsIonizing radiationCancerPhysicsGenetics

Abstract

fetched live from OpenAlex

Purpose: To use non‐invasive single‐cell Raman spectroscopy (RS) and principal component analysis (PCA) to analyze radiation‐induced biochemical changes in human tumour cell lines, and to correlate results with known radiosensitivity. Methods: Six human tumour cell lines, derived from prostate (DU145, PC3, and LNCaP), breast (MDA‐MB‐231 and MCF7) and lung (H460), were irradiated with single fractions (15, 30 or 50 Gy) of 6 MV photons. Remaining live cells were harvested for RS analysis at 0, 24, 48, and 72 hours post‐irradiation, along with unirradiated controls. Single‐cell Raman spectra were acquired from 20 cells per sample with a Raman microscope utilizing a 785 nm excitation laser. All spectra (200 per cell line) were post‐processed, and the total data set for each cell line was analyzed with PCA using standard algorithms. Results: One unique radiation‐induced PCA component was detected for each cell line by identification of statistically significant changes in the PCA score distributions for irradiated samples, as compared to unirradiated samples, in the first 24 to 72 hours post‐irradiation. Correlation analysis between radiation‐induced PCA components from the different cell lines shows that these RS radiation response signatures fall into 3 distinct RS categories: R1 (H460 and MCF7), R2 (MDA‐MB‐231 and PC3), and R3 (DU145 and LNCaP). These RS categories segregate according to radiosensitivity and p53 gene status. The R1 and R2 cell lines are radioresistant (SF2 > 0.6), whereas the R3 cell lines are radiosensitive (SF2 < 0.5). The R1 and R2 cell lines further segregate according to p53 status, as verified by cell cycle analysis post‐irradiation. Conclusions: This study demonstrates that RS is a powerful tool for non‐invasive radiobiological investigations, and is a promising technique for advancing the field of personalized radiation therapy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.307
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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