Multidimensional conformational analysis of allyl methyl disulfide: a key component of garlic
Bibliographic record
Abstract
Organosulfur compounds in garlic, like allyl methyl disulfide, have been found to be involved in antimutagenic, anticarcinogenic, antithrombotic, and lipid-lowering activities, and it has also been found to act as an antioxidant. Ab initio molecular computations were performed on dihydrogen disulfide (1) with respect to torsional angle τ1 = τ(H·S-S·H), hydrogen methyl disulfide (2) with respect to torsional angle τ1 = τ(H·S-S·CH3), and allyl methyl disulfide (3) with respect to torsional angles τ1 = τ(H3C2·CH2·S-S·CH3), τ2 = τ(H3C2·CH2-S·S·CH3), and τ3 = τ(H3C2-CH2·S·S·CH3). Potential energy curves (PEC) were obtained from 1 and 2, i.e., E = E(τ1), from which optimized structures were obtained at the HF/6-31G* level of theory. These optimized structures were used to investigate the potential energy hypersurface surface (PEHS) of 3, i.e., E = E(τ1,τ2,τ3). One-dimensional scans along τ2 and τ3 (where τ1 = ±90°; τ1 = 180°) were performed at the HF/3-21G* level of theory. From these scans, six lower energy pairs of enantiomeric minima (i.e., [g+g+g+| g-g-g-], [g+ag- | g-ag+], [g+g-g+ | g-g+g-], [g+g+g-| g-g-g+], [g+ag- | g-ag+], and [g+g-g-| g-g+g+]) as well as 3 higher energy minima (i.e., [g+g+s | g-g-s], [g+as | g-as], and [g+g-s | g-g+s]) were optimized at τ1 = ±90° at the HF/6-31G* and B3LYP/6-31G* levels of theory. The global minimum was determined to be the [g+g-g+ | g-g+g-] enantiomeric pair of conformers, and the fully symmetrical anti-anti-anti [a a a] structure was determined to be a second-order saddle point on the PEHS of 3. Although there are no stereocentres in 3, there is chirality in the conformational twist with respect to the [a a a] conformation through τ1 = τ2 = τ3 = 180°. Based on the energies and MO diagrams of the HUMO and LUMO +1 of 3, the anticarcinogenic and cholesterol lowering activity mechanism of 3 is presented.Key words: ab initio MO computations, allyl methyl disulfide, multidimensional conformational analysis (MDCA), anticarcinogenic, cholesterol lowering.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".