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Record W2093320498 · doi:10.1101/pdb.prot068544

Microultrasound and Its Application to Longitudinal Studies of Mouse Eye Development and Disease

2012· article· en· W2093320498 on OpenAlexfundno aff
F. Stuart Foster, Allison S. Brown

Bibliographic record

VenueCold Spring Harbor Protocols · 2012
Typearticle
Languageen
FieldEngineering
TopicPhotoacoustic and Ultrasonic Imaging
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchTerry Fox Foundation
KeywordsContext (archaeology)Preclinical imagingRetinoblastomaIn vivoHigh resolutionMedicinePathologyComputer scienceBiology

Abstract

fetched live from OpenAlex

Microultrasound imaging is a flexible high-resolution real-time in vivo imaging modality based on the transmission and the reception of ultrasound waves. Because of its high temporal (>250 Hz) and spatial (30-150 µm) resolutions and the noninvasive nature of ultrasound, microultrasound is used extensively in preclinical research to monitor functional and dynamic phenotypic changes in small animal models. Its ability to perform in vivo longitudinal monitoring of development, pathology, and therapeutic effectiveness is particularly advantageous. This article reviews the technology and the applications of high-frequency microultrasound for the study of mouse eye development from embryonic day E11.5 to postnatal day P16. Procedures for animal handling and scanning are given, and applications are described in the context of ocular development and disease. Quantitative analysis of the growth kinetics of the lens and the orbit is discussed. In addition, mouse models of retinoblastoma and glaucoma are followed as a function of disease progression to reveal their associated morphological and functional traits. Microultrasound is performed with high-frequency imaging equipment (from VisualSonics) operating at center frequencies between 15 and 50 MHz. These instruments provide both anatomical imaging as well as functional and molecular analyses of the living mouse.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Protocol · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.290
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2012
Admission routes1
Has abstractyes

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