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Record W2094623170 · doi:10.1139/b06-106

The structure of genetic diversity in Engelmann spruce and a comparison with blue spruce

2006· article· en· W2094623170 on OpenAlexvenueno aff
F. Thomas Ledig, Paul D. Hodgskiss, David R. Johnson

Bibliographic record

VenueCanadian Journal of Botany · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
FundersU.S. Forest Service
KeywordsPicea engelmanniiOutcrossingBiologyGenetic diversityGenetic distanceInbreedingPopulationPopulation geneticsEcologyBotanyPollenDemography

Abstract

fetched live from OpenAlex

Genetic diversity and genetic structure in Engelmann spruce (Picea engelmannii Parry ex Engelm.) were interpreted with respect to the effects of glacial and interglacial displacement and compared with patterns in blue spruce (Picea pungens Engelm.), which occupies a range well south of the last glacial front. On average, Engelmann spruce populations were polymorphic at 80% of 24 isozyme loci, with 2.4 alleles per locus and expected heterozygosity of 0.255. The respective means for four populations of blue spruce were 42.7%, 1.6 alleles, and 0.138. Of total diversity, 14.7% was among populations in Engelmann spruce and 8.6% in blue spruce. In Engelmann spruce, numbers of alleles increased from south to north. Recent bottlenecks were indicated in the three southernmost populations of Engelmann spruce and in the northernmost population of blue spruce. Cluster analysis divided Engelmann spruce into a northern group and a Southwestern group; however, populations from Utah were distributed among both clusters. Genetic distance was correlated with geographic distance between northern populations but not between Southwestern populations, where drift predominated over gene flow. In two Engelmann spruce populations from Utah, multilocus outcrossing rates were 0.951 (±0.016) and 0.940 (±0.071). At Flys Peak, Arizona, the southernmost location of Engelmann spruce, outcrossing was also high, 0.899 (±0.017). Thus, inbreeding coefficients observed for parental (–0.104 to 0.047) and filial (0.011 to 0.026) generations were low. Although Engelmann spruce seemed genetically robust, the evidence of bottlenecks in the southern extreme of its range suggested future problems in an era of global warming.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.197
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2006
Admission routes1
Has abstractyes

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