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A PORTABLE RAMAN SYSTEM FOR THE IDENTIFICATION OF FOODBORNE PATHOGENIC BACTERIA

2008· article· en· W2095175281 on OpenAlexaff
Bingfeng Luo, Min Lin

Bibliographic record

VenueJournal of Rapid Methods & Automation in Microbiology · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsCanadian Food Inspection Agency
Fundersnot available
KeywordsRaman spectroscopyMaterials scienceSpectrometerRaman scatteringLaserNanotechnologyOpticsPhysics

Abstract

fetched live from OpenAlex

ABSTRACT Raman spectroscopy is emerging as an important nondestructive, noninvasive, analytical tool for the analysis of biologic materials. This study presents a procedure to make use of commercial off‐the‐shelf components to construct a portable dispersive Raman system and evaluates it for discrimination of bacteria by surface‐enhanced Raman scattering (SERS). The system consists of a semiconductor laser (784.8 nm), a fiber optic probe ( ∼ 135 µm focal spot), a mini spectrometer and a computer. UV‐visible spectroscopy and transmission electron microscopy analysis of four silver colloid preparations produced in this study, together with the SERS spectra of Listeria innocua adsorbed on colloidal particles, indicated that silver colloids with the extinction maximum at > 415 nm (particle size > 75 nm) and a larger long wavelength tail are capable of promoting SERS of bacteria. The SERS spectra of Listeria monocytogenes, Escherichia coli O157:H7 and Salmonella enterica were acquired with the system, leading to an unambiguous identification of these bacterial foodborne pathogens on the basis of their unique spectral bands. This study demonstrated the feasibility of constructing a low‐cost compact Raman system using commercially available components to perform the SERS analysis of bacteria. PRACTICAL APPLICATIONS Commercial off‐the‐shelf components such as a semiconductor laser, a fiber optic probe and a mini spectrometer can be used to construct a portable, low‐cost dispersive Raman system. Such system allows for the acquisition of SERS spectra of bacteria adsorbed on silver colloidal nanoparticles, as exemplified by three important bacterial foodborne pathogens L. monocytogenes (serotype 4b), E. coli O157:H7 and S. enterica (serotype Typhimurium DT 104). An unambiguous identification of these pathogens was achieved based on their unique spectral bands, indicating that an inexpensive dispersive Raman system such as the one described here may be built for the rapid characterization of bacteria isolates from food, clinical and environment samples using SERS spectral fingerprints.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.167
Threshold uncertainty score0.256

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.363
Teacher spread0.343 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2008
Admission routes1
Has abstractyes

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