MétaCan
Menu
Back to cohort
Record W2095845635 · doi:10.5897/ajmr12.1218

Comparative analysis of the miRNA profiles from Taenia solium and Taenia asiatica adult

2014· article· en· W2095845635 on OpenAlexfundno aff
Lin Ai, Mu-Xin Chen, Yongnian Zhang, Shaohong Chen, Zhou Xiao-Nong, Jiaxu Chen

Bibliographic record

VenueAfrican Journal of Microbiology Research · 2014
Typearticle
Languageen
FieldMedicine
TopicParasitic infections in humans and animals
Canadian institutionsnot available
FundersLanzhou Veterinary Research Institute, Chinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesState Key Laboratory of Veterinary Etiological BiologyInternational Development Research Centre
KeywordsTaenia soliumBiologyTaeniaTaeniasisHost (biology)CysticercosisPhylogenetic treeVeterinary medicineVirologyZoologyHelminthsGeneticsGeneMedicineCestode infections

Abstract

fetched live from OpenAlex

Taenia solium and Taenia asiatica are zoonotic parasites which are transmitted between pigs and humans, with pigs acting as the intermediate host and humans as the definitive host. The aim of the present study was to compare the microRNA (miRNA) profiles between T. solium and T. asiatica by Solexa deep sequencing and bioinformatic analyses. A total of 18.26 and 15.24 million reads with high quality and three new miRNAs were obtained in each species, respectively. The two cestodes shared nearly the same level of total sRNA, but the known miRNAs were in a very different manner. Nucleotide guanine (G) and uracil (U) were the most frequently used first nucleotide in both T. solium and T. asiatica, respectively. Furthermore, it was also found that there were great differences in the kinds and copy numbers of miRNAs among the two Taenia species, which might indicate the different evolutions in the two parasites. To our knowledge, this is the first report on the characterization of the miRNA profiles for the two Taenia cestodes, and it would lay a foundation for further functional studies of miRNAs of T. solium and T. asiatica.   Key words: Taenia solium, Taenia asiatica, microRNA profiles, human, pig.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.709
Threshold uncertainty score0.371

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.381
Teacher spread0.330 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2014
Admission routes1
Has abstractyes

Explore more

Same venueAfrican Journal of Microbiology ResearchSame topicParasitic infections in humans and animalsFrench-language works237,207