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Record W2097913561 · doi:10.1002/rcm.2366

Macrocyclic effect of auxiliary ligand on the gas‐phase dissociation of ternary copper(II)–GGX complexes

2006· article· en· W2097913561 on OpenAlexaff
Cory N. W. Lam, S. O. Siu, Galina Orlova, Ivan K. Chu

Bibliographic record

VenueRapid Communications in Mass Spectrometry · 2006
Typearticle
Languageen
FieldChemistry
TopicMass Spectrometry Techniques and Applications
Canadian institutionsSt. Francis Xavier University
Fundersnot available
KeywordsChemistryTripeptideSteric effectsStereochemistryPeptideCationic polymerizationLigand (biochemistry)CrystallographyDissociation (chemistry)ChelationMedicinal chemistryInorganic chemistryPolymer chemistryOrganic chemistryReceptor

Abstract

fetched live from OpenAlex

Abstract Previous studies into the dissociation of [Cu II (dien)peptide] . 2+ ions (dien = diethylenetriamine) have shown that NH‐containing auxiliary ligands do not favor the formation of [peptide] . + species; instead, they promote proton‐transfer reactions, especially for peptides containing basic amino residues. Formation of radical cationic tripeptides of the form GGX . + [GGX = glycylglycyl(residue X)] becomes feasible upon substituting the open‐chain tridentate ligand dien with its analogous cyclic ligand, 1,4,7‐triazacyclononane (9‐aneN 3 ); i.e., from [Cu II (9‐aneN 3 )GGX] . 2+ ions. Similar enhancements occur when using 1,4,7,10‐tetraoxacyclododecane (12‐crown‐4) in place of its open‐chain analog, 2,5,8,11‐tetraoxadecane (triglyme). We have demonstrated that a sterically encumbered auxiliary macrocyclic ligand within [Cu II (L)GGX] . 2+ complex ions [where L = 9‐aneN 3 or 12‐crown‐4] facilitates the formation of radical cationic peptides through gas‐phase fragmentation. We verified our experimental observations by examining the reactivities of a series of 19 tripeptides of the type GGX that differ only in the identity of their C‐terminal residue. The energy of the electron‐transfer reaction correlates well with the bond‐dissociation energy of the peptide–Cu(II) interaction; the presence of a constrained macrocyclic ligand weakens metal–peptide chelation through steric repulsion between the ligand and the peptide, and this situation may lead to more favorable radical cationic peptide formation. Copyright © 2006 John Wiley & Sons, Ltd.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.110
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0020.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.297
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2006
Admission routes1
Has abstractyes

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