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Record W2098621275 · doi:10.3852/07-080r

Taxonomic revision of the<i>Lecania cyrtella</i>group based on molecular and morphological evidence

2008· article· en· W2098621275 on OpenAlexaboutno aff
Rikke Reese Næsborg

Bibliographic record

VenueMycologia · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsnot available
Fundersnot available
KeywordsMonophylyBiologyPhylogenetic treeRange (aeronautics)Key (lock)Taxonomy (biology)AscomycotaZoologyEvolutionary biologyCladeEcologyGeneGenetics

Abstract

fetched live from OpenAlex

This investigation elucidates relationships within the Lecania cyrtella group (Ramalinaceae, lichenized Ascomycota) by employing morphological, anatomical and molecular methods. The morphological studies included eleven species of Lecania, L. cyrtella, L. cyrtellina, L. dubitans, L. erysibe, L. hutchinsiae, L. leprosa, L. madida, L. prasinoides, L. sambucina, L. sordida and L. sylvestris, and a key to the species plus species descriptions are provided. Lecania madida, a new species from the Pacific Northwest of North America, L. leprosa, a new species from eastern Europe, and L. sordida, a new species from Europe, are described here. The known range of L. prasinoides is greatly extended to include the Baltic countries, Nordic countries and western Canada. Lectotypes are designated for L. cyrtella and L. sambucina. Molecular relationships within the group were examined with haplotype network estimations and phylogenetic reconstructions. Part of the IGS region as well as the complete ITS region were sequenced and analyzed. Both the haplotype network and the phylogenetic analyses indicate that the included species, as conceived in the morphological examinations, all are monophyletic.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.207
Teacher spread0.178 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2008
Admission routes1
Has abstractyes

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