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Record W2099142769 · doi:10.18632/oncotarget.4739

Low doses of X-rays induce prolonged and ATM-independent persistence of γH2AX foci in human gingival mesenchymal stem cells

2015· article· en· W2099142769 on OpenAlexaffabout
Andreyan N. Osipov, Маргарита Пустовалова, Anna Grekhova, Petr S. Eremin, N. Yu. Vorobyova, А. А Пулин, Alex Zhavoronkov, S. A. Roumiantsev, Dmitry Klokov, I. I Eremin

Bibliographic record

VenueOncotarget · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDNA Repair Mechanisms
Canadian institutionsCanadian Nuclear Laboratories
FundersRussian Science FoundationRussian Foundation for Basic Research
KeywordsMesenchymal stem cellDNA damageHistoneIrradiationCancer researchPersistence (discontinuity)Stem cellMolecular biologyChemistryMedicinePathologyDNABiologyCell biologyBiochemistry

Abstract

fetched live from OpenAlex

// Andreyan N. Osipov 1, 2, 3, 4 , Margarita Pustovalova 1, 2 , Anna Grekhova 1, 5 , Petr Eremin 1 , Natalia Vorobyova 1, 3 , Andrey Pulin 1 , Alex Zhavoronkov 4, 6, 7 , Sergey Roumiantsev 3, 4, 8 , Dmitry Y. Klokov 9 , Ilya Eremin 1 1 State Research Center - Burnasyan Federal Medical Biophysical Center of Federal Medical Biological Agency (SRC-FMBC), Moscow, Russia 2 Semenov Institute of Chemical Physics, Russian Academy of Sciences, Moscow, Russia 3 Dmitry Rogachev Federal Research Center of Pediatric Hematology, Oncology and Immunology, Moscow, Russia 4 Moscow Institute of Physics and Technology, Dolgoprudny, Moscow Region, Russia 5 Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Moscow, Russia 6 Insilico Medicine, Inc, ETC, Johns Hopkins University, Baltimore, Maryland, USA 7 The Biogerontology Research Foundation, BGRF, London, UK 8 N.I. Pirogov Russian National Research Medical University, Moscow, Russia 9 Canadian Nuclear Laboratories, Chalk River, Ontario, Canada Correspondence to: Andreyan N. Osipov, e-mail: andreyan.osipov@gmail.com Keywords: mesenchymal stem cells, DNA double-strand breaks, DNA repair, X-rays, low doses Received: April 08, 2015 Accepted: July 10, 2015 Published: July 23, 2015 ABSTRACT Diagnostic imaging delivering low doses of radiation often accompany human mesenchymal stem cells (MSCs)-based therapies. However, effects of low dose radiation on MSCs are poorly characterized. Here we examine patterns of phosphorylated histone H2AX (γH2AX) and phospho-S1981 ATM (pATM) foci formation in human gingiva-derived MSCs exposed to X-rays in time-course and dose-response experiments. Both γH2AX and pATM foci accumulated linearly with dose early after irradiation (5–60 min), with a maximum induction observed at 30–60 min (37 ± 3 and 32 ± 3 foci/cell/Gy for γH2AX and pATM, respectively). The number of γH2AX foci produced by intermediate doses (160 and 250 mGy) significantly decreased (40–60%) between 60 and 240 min post-irradiation, indicating rejoining of DNA double-strand breaks. In contrast, γH2AX foci produced by low doses (20–80 mGy) did not change after 60 min. The number of pATM foci between 60 and 240 min decreased down to control values in a dose-independent manner. Similar kinetics was observed for pATM foci co-localized with γH2AX foci. Collectively, our results suggest differential DNA double-strand break signaling and processing in response to low vs. intermediate doses of X-rays in human MSCs. Furthermore, mechanisms governing the prolonged persistence of γH2AX foci in these cells appear to be ATM-independent.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.250
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations54
Published2015
Admission routes2
Has abstractyes

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