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Record W2099980478 · doi:10.1139/b06-013

Differences between two green algae in biological availability of iron bound to strong chelators

2006· article· en· W2099980478 on OpenAlexafffundvenue
Harold G. Weger, Carlyn J. Matz, Rachel S. Magnus, Crystal N. Walker, Michael B. Fink, Ron G. Treble

Bibliographic record

VenueCanadian Journal of Botany · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsSaskatchewan HealthUniversity of Regina
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsChlamydomonasChelationGreen algaeAlgaeSiderophoreChlamydomonas reinhardtiiFerricChemistryChlorophyceaeBotanyChlorophytaBiochemistryBiologyInorganic chemistryGene

Abstract

fetched live from OpenAlex

N,N′-di(2-hydroxybenzoyl)-ethylenediamine-N,N′-diacetic acid (HBED) is a very strong Fe3+ chelator. Strategy I vascular plants, which use a reductive system for iron acquisition, similar to many green algae, are able to access iron from HBED (R.L. Chaney. 1988. J. Plant Nutr. 11: 1033–1050). However, iron-limited cells of the Strategy I green alga Chlamydomonas reinhardtii Dangeard were unable to access iron present as Fe3+–HBED. In contrast, Fe3+ chelated with hydroxyethylethylenediaminetriacetic acid (HEDTA; a weaker chelator) was rapidly taken up by iron-limited Chlamydomonas cells. Chlamydomonas ferric reduction rates with Fe3+–HBED were approximately 15% of the rate observed with Fe3+–HEDTA, suggesting that low reduction rates with Fe3+–HBED might be one factor in the low rate of iron acquisition. By contrast, iron-limited cells of the Strategy I green alga Chlorella kessleri Fott et Nováková were able to rapidly assimilate Fe3+ chelated by HBED, although ferric reduction rates with Fe3+–HBED were approximately 38% the rate of activity with Fe3+–HEDTA. Similar differential iron uptake rates for the two algal species were obtained using the strong Fe3+ chelator (and siderophore analogue) desferrioxamine B mesylate and the cyanobacterial siderophore schizokinen. These results suggest that there are differences among Strategy I green algae in their abilities to acquire Fe3+ from various ferric chelates: not all Strategy I algae can equally access tightly complexed Fe3+. Chlamydomonas appears to be the first documented Strategy I organism that is unable to acquire iron from Fe3+–HBED. These results also suggest that green algal iron acquisition from siderophores is species dependent. Finally, we suggest that iron acquisition from Fe3+–HBED might serve as an assay for an organisms’ ability to access tightly complexed iron.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.238
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2006
Admission routes3
Has abstractyes

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