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Record W2108529013 · doi:10.5194/bgd-8-9235-2011

An approach to the investigation of CO<sub>2</sub> uptake by soil microorganisms

2011· article· en· W2108529013 on OpenAlexaff
Kris M. Hart, Brian W. Moran, Christopher C. R. Allen, V. N. Kouloumbos, Seth F. Oppenheimer, Leon Barron, André J. Simpson, Leonid Kulakov, Brian P. Kelleher

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoil Carbon and Nitrogen Dynamics
Canadian institutionsThe Scarborough HospitalUniversity of Toronto
FundersGeological Survey of Ireland
KeywordsIncubationEnvironmental chemistryMicroorganismChemistrySoil waterAlgaePhotosynthesisOrganic matterMicrobial population biologyAtmosphere (unit)Environmental scienceAgronomyBacteriaBotanySoil scienceBiologyBiochemistry

Abstract

fetched live from OpenAlex

Abstract. Sequestration of CO2 via biological sinks is a matter of great scientific importance due to their potential to lower atmospheric CO2 levels. In this study a custom built incubation chamber was used to cultivate a soil microbial community, under ideal conditions, to investigate soil chemoautotrophy. The internal atmospheric CO2 concentrations were monitored and used to estimate the mass of CO2 uptake. It was found after careful background corrections that 256.4 μg CO2 kg−1 dry soil was removed from the chamber atmosphere over 16 h. Comparisons were made to photosynthetic controls (i.e. grass and soil algae) whereupon it was observed that the chemoautotrophic fraction sequestered 2.6 and 5.4 % of that taken up by grass and soil algae respectively. Using isotopically labelled 13CO2 and GCMS-IRMS it was also possible to extract and identify labelled fatty acids after a short incubation time, hence confirming the CO2 uptake potential of the soil slurry. Provided with favourable conditions, chemoautotrophic soil bacteria have the potential to make a significant impact on inorganic carbon sequestration within the environment. The results of this in vivo study have provided ground work for future studies intending to mimic the in situ environment by providing a reliable method for investigating CO2 uptake by soil microorganisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.222
Teacher spread0.172 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2011
Admission routes1
Has abstractyes

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