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Record W2110396304 · doi:10.1073/pnas.1118760109

Y-chromosome analysis reveals genetic divergence and new founding native lineages in Athapaskan- and Eskimoan-speaking populations

2012· article· en· W2110396304 on OpenAlexaffabout
Matthew C. Dulik, Amanda C. Owings, Jill B. Gaieski, Miguel G. Vilar, Alestine Andre, Crystal Lennie, Mary Adele Mackenzie, Ingrid Kritsch, Sharon Snowshoe, Ruth Wright, James P. Martin, Nancy Gibson, T. Daniel Andrews, Theodore G. Schurr, Syama Adhikarla, Christina Adler, Elena Balanovska, Oleg Balanovsky, Jaume Bertranpetit, Andrew Clarke, David Comas, Alan Cooper, Clio S. I. Der Sarkissian, ArunKumar GaneshPrasad, Wolfgang Haak, Marc Haber, Angela Hobbs, Asif Javed, Jin Li, Matthew E. Kaplan, Shilin Li, Begoña Martínez‐Cruz, Elizabeth Matisoo‐Smith, Marta Melé, Nirav Merchant, R. John Mitchell, Laxmi Parida, Ramasamy Pitchappan, Daniel E. Platt, Lluís Quintana‐Murci, Colin Renfrew, Daniela R. Lacerda, Ajay K. Royyuru, Fabrício R. Santos, Himla Soodyall, David F. Soria Hernanz, Pandikumar Swamikrishnan, Chris Tyler‐Smith, Arun Varatharajan Santhakumari, Pedro Paulo Vieira, R. Spencer Wells, Pierre Zalloua, Janet Ziegle

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicForensic and Genetic Research
Canadian institutionsCanadian HeritageTlicho Community Services AgencyInuvialuit Regional CorporationNunavut Research Institute
FundersUniversity of PennsylvaniaNational Geographic Society
KeywordsBiologyPopulationEvolutionary biologyGeneticsDivergence (linguistics)Y chromosomeDemographyLinguisticsSociologyGene

Abstract

fetched live from OpenAlex

For decades, the peopling of the Americas has been explored through the analysis of uniparentally inherited genetic systems in Native American populations and the comparison of these genetic data with current linguistic groupings. In northern North America, two language families predominate: Eskimo-Aleut and Na-Dene. Although the genetic evidence from nuclear and mtDNA loci suggest that speakers of these language families share a distinct biological origin, this model has not been examined using data from paternally inherited Y chromosomes. To test this hypothesis and elucidate the migration histories of Eskimoan- and Athapaskan-speaking populations, we analyzed Y-chromosomal data from Inuvialuit, Gwich'in, and Tłįch populations living in the Northwest Territories of Canada. Over 100 biallelic markers and 19 chromosome short tandem repeats (STRs) were genotyped to produce a high-resolution dataset of Y chromosomes from these groups. Among these markers is an SNP discovered in the Inuvialuit that differentiates them from other Aboriginal and Native American populations. The data suggest that Canadian Eskimoan- and Athapaskan-speaking populations are genetically distinct from one another and that the formation of these groups was the result of two population expansions that occurred after the initial movement of people into the Americas. In addition, the population history of Athapaskan speakers is complex, with the Tłįch being distinct from other Athapaskan groups. The high-resolution biallelic data also make clear that Y-chromosomal diversity among the first Native Americans was greater than previously recognized.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.028
Threshold uncertainty score0.055

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.081
GPT teacher head0.365
Teacher spread0.284 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations58
Published2012
Admission routes2
Has abstractyes

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