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Record W2111025350 · doi:10.1525/auk.2011.11011

Rangewide population genetic structure of Xantus's Murrelet (<i>Synthliboramphus hypoleucus</i>)

2012· article· en· W2111025350 on OpenAlexaff
Tim P. Birt, Harry R. Carter, Darrell L. Whitworth, Anne McDonald, Scott H. Newman, Franklin Gress, Eduardo Palacios, Josh S. Koepke, Vicki L. Friesen

Bibliographic record

VenueThe Auk · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsCarbon Engineering (Canada)Queen's University
FundersU.S. NavyU.S. Fish and Wildlife ServiceMassachusetts Department of Fish and GameU.S. Geological SurveySecretaría de Medio Ambiente y Recursos NaturalesCalifornia Department of Fish and Game
KeywordsSubspeciesSympatric speciationGene flowRange (aeronautics)BiologyPopulationZoologyEcologymtDNA control regionGenetic structureSeabirdHybrid zoneGeographyGenetic variationGeneDemographyGenetics

Abstract

fetched live from OpenAlex

Population genetic structure was characterized in Xantus's Murrelet (Synthliboramphus hypoleucus) by analyzing variation in the mitochondrial control region (505 samples) and 12 microsatellite loci (428 samples) in birds captured at all 13 current breeding areas in southern California and northwestern Baja California, Mexico. The two types of molecular markers were consistent in revealing strong genetic differentiation between the two currently recognized subspecies (S. h. hypoleucus and S. h. scrippsi) and little or no differentiation among breeding areas within subspecies. Estimates of gene flow were essentially zero, and no evidence for admixture was found. Gene flow among breeding locations within subspecies, on the other hand, was seemingly high. Given these genetic results, as well as clear morphological differences between the subspecies and the apparent lack of interbreeding at breeding areas where the two forms are sympatric, we suggest that two species be recognized. Both forms are genetically distinct from Craveri's Murrelet (S. craveri), a closely related species whose breeding range partially overlaps that of Xantus's Murrelet. Taxonomic subdivision of Xantus's Murrelet introduces new conservation concerns, especially for S. h. hypoleucus, which urgently requires greater study and protective efforts.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.614
Threshold uncertainty score0.374

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.219
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2012
Admission routes1
Has abstractyes

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