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Record W2114108681 · doi:10.4319/lo.2006.51.1.0047

Archaea in particle-rich waters of the Beaufort Shelf and Franklin Bay, Canadian Arctic: Clues to an allochthonous origin?

2006· article· en· W2114108681 on OpenAlexaffabout
Llyd E. Wells, Michael Cordray, Sarah Bowerman, Lisa A. Miller, Warwick F. Vincent, Jody W. Deming

Bibliographic record

VenueLimnology and Oceanography · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversité LavalFisheries and Oceans Canada
FundersNOAA Ocean ExplorationUniversity of Miami
KeywordsBacterioplanktonNepheloid layerOceanographyArchaeaParticulatesBayArcticWater columnEnvironmental scienceDissolved organic carbonTotal organic carbonEnvironmental chemistryBenthic zoneChlorophyll aOrganic matterPhytoplanktonEcologyChemistryGeologyBiologyNutrientBacteriaBotany

Abstract

fetched live from OpenAlex

We used 4',6-diamidino-2-phenylindole (DAPI) staining and fluorescent in situ hybridization to examine total bacterioplankton and archaeal distributions in surface waters and in deeper nepheloid layers and particle-poor waters across the Beaufort Shelf of the Canadian Arctic, including the Mackenzie River and Kugmallit Bay, as well as more distant Franklin Bay. Although the regional distribution of bacterioplankton was best explained by salinity (rs = -0.89, n = 28, p < 0.001) and indicators of primary production (chlorophyll a [Chl a], total organic carbon, and the ratio of Chl a to particulate organic carbon [Chl a: POC]), that of Archaea instead reflected measures of particulate matter, specifically microscopically determined particle concentration (rs = 0.85, n = 30, p < 0.001), suspended particulate matter, POC, particulate organic nitrogen (PON), and the beam attenuation coefficient. Moreover, when compared with similarly deep particle-poor waters, nepheloid layers were significantly enriched in Archaea (median concentration of 6.00 x 104 mL-1 [15.5% of bacterioplankton] vs. 1.79 x 4 mL-1 [3.6%]; p < 0.05), but not total bacterioplankton. The relationship between Archaea and particles, the dominance of the Mackenzie River as the regional particle source, the detection of highest archaeal concentrations (11.5-14.4 x 4 mL-1) in the river, and the highly significant correlation (rs = 0.97, n = 12, p < 0.001) between Archaea in particle-rich waters and PON (the river providing the upper end member) suggest that many of these Archaea derive from the river.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.589
Threshold uncertainty score0.944

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.203
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations70
Published2006
Admission routes2
Has abstractyes

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