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Record W2114371151 · doi:10.1139/b10-045

Genetic diversity of mocó cotton (<i>Gossypium hirsutum</i>race<i>marie-galante</i>) from the northeast of Brazil: implications for conservation

2010· article· en· W2114371151 on OpenAlexvenueno aff
Ivandilson Pessoa Pinto de Menezes, Paulo Augusto Vianna Barroso, Lúcia Vieira Hoffmann, Valeska Silva Lucena, Marc Giband

Bibliographic record

VenueBotany · 2010
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicResearch in Cotton Cultivation
Canadian institutionsnot available
FundersConselho Nacional de Desenvolvimento Científico e TecnológicoMinistry of Environment
KeywordsGenetic diversityEndogamyBiologyAlleleMicrosatellitePopulationLocus (genetics)GeneticsDemography

Abstract

fetched live from OpenAlex

Mocó cotton ( Gossypium hirsutum L. race marie-galante (Watt) Hutch.) is a potential source of valuable alleles for breeding programs, mainly because of its great adaptability to semi-arid conditions. With the aim of quantifying mocó cotton genetic variability, 187 plants collected in the northeast of Brazil were evaluated using 12 microsatellite markers. A total of 62 alleles were amplified, ranging from three to eight polymorphic alleles per locus. Total genetic diversity was high (0.52), and when measured on a per state basis, was of 0.37 on average. The population showed a low level of heterozygozity (HO= 0.16), reflecting a high level of endogamy (FIS= 0.67). Phylogenetic analysis using the neighbor-joining method revealed that plants sampled in different states tended to cluster according to their geographic origin, except for those collected in the states of Paraíba and Rio Grande do Norte, which grouped together. Plants from the state of Piauí formed two groups, one with an apparent allelic contribution from G. barbadense, while the second group of plants was closer to those from the states of Paraíba and Rio Grande do Norte. Despite the high genetic diversity that was observed in the remaining populations, urgent conservation efforts should be undertaken, owing to the high level of endogamy and accelerated extinction process that characterizes these populations. Such efforts should focus on the collection and ex situ maintenance of representative genetic diversity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.040
Threshold uncertainty score0.079

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.266
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2010
Admission routes1
Has abstractyes

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