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Record W2117118030 · doi:10.1136/jmedgenet-2012-100898

Germline <i>DICER1</i> mutation and associated loss of heterozygosity in a pineoblastoma: Figure 1

2012· article· en· W2117118030 on OpenAlexafffund
Nelly Sabbaghian, Nancy Hamel, Archana Srivastava, Steffen Albrecht, John R. Priest, William D. Foulkes

Bibliographic record

VenueJournal of Medical Genetics · 2012
Typearticle
Languageen
FieldMedicine
TopicCongenital Diaphragmatic Hernia Studies
Canadian institutionsMcGill University Health CentreMcGill UniversityMontreal Children's HospitalJewish General Hospital
FundersBrain Tumour Foundation of CanadaMcGill University
KeywordsLoss of heterozygosityGermlineGermline mutationBiologyRetinoblastomaMutationCancer researchGeneticsAllelePathologyMedicineGene

Abstract

fetched live from OpenAlex

Pineoblastomas occur in RB-1 mutation carriers,1 but are rarely seen in association with other hereditary syndromes.2 Germline DICER1 mutations are associated with embryonal tumours such as pleuropulmonary blastoma (PPB),3 ,4 so we hypothesised that such mutations might also occur in children with pineoblastoma. Here we describe a novel deleterious germline DICER1 mutation in a young child with a highly aggressive pineoblastoma. In addition, we observed loss of heterozygosity (LOH) of the wild-type allele, an event not previously reported in DICER1 associated tumours.5 ,6 Our observations suggest: (1) pineoblastomas are associated with germline DICER1 mutations; and (2) unexpectedly, tumour cells can thrive in the absence of functional DICER1 . The pineal gland, so named by Galen because of its resemblance to a pine nut, is a ∼175 mg midline structure situated on the posterior wall of the third ventricle, deep between the cerebral hemispheres. Pineal gland tumours are often derived from ectopic germ cell tissue, but pineocytomas and pineoblastomas also occur. A pineoblastoma is a supratentorial primitive neuroectodermal tumour arising in the pineal gland. Germline mutations in tumour suppressor genes have rarely been associated with pineoblastomas,1 ,2 but mutations in RB-1 can result in so-called ‘trilateral retinoblastoma’.1 We obtained …

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.051
Threshold uncertainty score0.324

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.301
Teacher spread0.284 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations69
Published2012
Admission routes2
Has abstractyes

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