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Stable isotope analysis: modelling lipid normalization for muscle and eggs from arctic mammals and birds

2010· article· en· W2117134526 on OpenAlexaff
Dorothée Ehrich, Arnaud Tarroux, Jenny Stien, Nicolas Lecomte, Siw T. Killengreen, Dominique Berteaux, Nigel G. Yoccoz

Bibliographic record

VenueMethods in Ecology and Evolution · 2010
Typearticle
Languageen
FieldEnvironmental Science
TopicIsotope Analysis in Ecology
Canadian institutionsCenter for Northern StudiesUniversité du Québec à Rimouski
Fundersnot available
KeywordsNormalization (sociology)WaterfowlArcticIsotopes of carbonδ13CBiologyIsotopeIsotope analysisEcologyStable isotope ratioZoologyChemistryEnvironmental chemistryTotal organic carbonPhysics

Abstract

fetched live from OpenAlex

Summary 1. Lipids are more depleted in 13 C than proteins. Variable lipid contents in tissues affect therefore the measurements of stable carbon isotope ratios. Model based (also called mathematical) normalization has been suggested to correct δ 13 C values using the ratio of carbon to nitrogen (C/N) as a proxy for lipid content. This approach has not been thoroughly validated for terrestrial animals and it is not clear to what extent it is generally applicable or species/tissue specific. 2. Ratios of stable carbon isotopes (δ 13 C) were obtained for muscle samples of 22 mainly terrestrial arctic mammal and bird species and for egg samples of 32 bird species from nine sites in the circumpolar Arctic. We used linear and nonlinear equations to model the difference in δ 13 C between samples from which lipids had been extracted chemically and bulk tissue samples. Models were compared on the basis of a model selection criterion (AIC) and of prediction error as estimated by cross‐validation. 3. For muscle samples, a linear and a nonlinear equation performed equally well. The observed values were also well predicted by a previously published general equation for aquatic organisms. For egg samples, a nonlinear equation fitted separately to waterfowl and non waterfowl bird species fitted the data best. Prediction errors were, however, larger than for muscle samples. 4. The generality of the inferred normalization equations was assessed by applying them to a second data set from a similar ecosystem, but produced in the frame of another study. The predicted lean δ 13 C values were within 0·5‰ of the observed values for 73% of the muscle samples, but only for 27% of the egg samples. 5. Based on our results, we recommend model based normalization of δ 13 C values as an economic way to deal with varying lipid contents in muscle samples of mammals and birds. For egg samples, on the contrary, model based predictions had large errors. Therefore, we recommend chemical lipid extraction in order to estimate lipid‐free δ 13 C values for egg content.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.380
Threshold uncertainty score0.841

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.305
Teacher spread0.289 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations60
Published2010
Admission routes1
Has abstractyes

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