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Record W2118831378 · doi:10.1136/gutjnl-2012-302514d.4

PWE-004 A study of faecal volatile organic compounds metabolome in healthy population across the countries

2012· article· en· W2118831378 on OpenAlexaffabout
Ishfaq Ahmed, Vicky De Preter, Kevin P. Rioux, Norman Ratcliffe, C Probert

Bibliographic record

VenueGut · 2012
Typearticle
Languageen
FieldEngineering
TopicAdvanced Chemical Sensor Technologies
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsPopulationFecesDiscriminant function analysisUrineMedicinePopulation studyUnivariate analysisMultivariate analysisBiologyInternal medicineEnvironmental healthEcology

Abstract

fetched live from OpenAlex

Introduction Faecal biomarkers are emerging non-invasive tools for diagnosing gastrointestinal disorders. Faecal volatile organic compounds (VOCs) have been studied more recently in clinical diagnosis. Pattern of faecal VOCs in healthy population may provide basis for understanding changes in disease conditions. The VOCs within the metaboloms may be different across the countries due to differences in dietary habits and environmental conditions and may have implications in developing their clinical utility. Methods We aim to study the faecal VOCs of the healthy population from three different countries that is, England, Belgium and Canada. A total of 159 health volunteers (English=109, F=69), (Belgium=20, F=14), (Canada=30, F=17) donated faecal samples. Fresh samples were aliquoted in 18 mls sealed vials. VOCs were extracted using solid phase micro extraction and were analysed using gas chromatography–mass spectrometery. VOCs were identified using NIST library search comparing their fragment pattern. Results A total of 232 VOCs were identified. Using binary data (presence or absence of VOCs), univariate analysis was used to identify those VOCs which were statistically significant (p<0.05) in discerning differences between the three population groups. Alcohols, ketones and esters were predominantly associated with English volunteers compared to both Canadian and Belgium volunteers while aldehydes and alkenes were predominantly detected VOCs in the Canadian and Belgium groups respectively. A multivariate discriminant function analysis utilising these VOCs was able to differentiate three groups with a sensitivity of 96% and specificity of 90%. Conclusion The observed differences in the faecal VOCs metabolites of the healthy population in different countries may provide important basis in the clinical utility of faecal biomarkers. It may also provide information in studying the differences in disease prevalence and behaviour in different countries. Further studies are warranted to explore this area. Competing interests None declared. References 1. Probert CS , Ahmed I, Khalid T, et al. Volatile organic compounds as diagnostic biomarkers in gastrointestinal and liver diseases. J Gastrointestin Liver Dis 2009; 18 :337–43. 2. Angriman I , Scarpa M, D'Incà R, et al. Enzymes in feces: useful markers of chronic inflammatory bowel disease. Clin Chim Acta 2007; 381 :63–8.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.109
Threshold uncertainty score0.302

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.275
Teacher spread0.262 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2012
Admission routes2
Has abstractyes

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