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Record W2120230274 · doi:10.1897/04-586r.1

The biotic ligand model for plants and metals: Technical challenges for field application

2006· article· en· W2120230274 on OpenAlexaff
Paula M.C. Antunes, Edward Berkelaar, David Boyle, Beverley Hale, William H. Hendershot, Astrid Voigt

Bibliographic record

VenueEnvironmental Toxicology and Chemistry · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicHeavy metals in environment
Canadian institutionsMcGill UniversityRedeemer UniversityUniversity of Guelph
Fundersnot available
KeywordsBiotic Ligand ModelBioaccumulationGenetic algorithmEnvironmental chemistryMetalChemistrySoil waterMetal ions in aqueous solutionTrace metalMetal toxicityLigand (biochemistry)Dissociation (chemistry)Environmental scienceSoil scienceEcologyHeavy metalsDissolved organic carbonBiologyBiochemistry

Abstract

fetched live from OpenAlex

To improve predictions of phytoavailable metal, the mechanistic bases of bioaccumulation and toxicity of metals to plants can be integrated into a biotic ligand model (BLM). There are a number of significant challenges to the application of the BLM to plants in soils, including reliable measurements of free ion concentrations for the metals of interest in rhizospheric soil solution, as well as other free ions, and concentrations of ligands to which the ions could bind; identification of the simplest model that can adequately predict root accumulation, and the potential for more complex models to add accuracy to the predictions; incorporating the dissociation of labile metal complexes (i.e., nonequilibrium processes) into a BLM, which is an equilibrium model; application of factors in a BLM that adequately describe translocation, in order to estimate metal concentration and speciation in plant shoots. The review concluded that the ability to estimate trace metal speciation in samples of soil solution are not likely to be better than within one order of magnitude of actual, thus this would be an additional source of uncertainty to the predictions of toxicity. Further, regulatory use of the BLM would require mechanistic bases; and, until root ligands associated with toxicity are well characterized, incorporating the ameliorative effects of competitive cations cannot be mechanistically based. As well, a functional BLM for soils with lower metal free ion activities will have to include kinetic data for metal-ligand complexes, as their association/disassociation may constitute a greater metal supply to roots than what would be predicted by the free ion concentration in soil solution. To apply the BLM to trophic transfer where metal concentration in plant shoots is the main focus, a probabilistic approach using experimentally determined root-shoot partitioning of metals might permit estimates of shoot accumulation from root data, to within one or two orders of magnitude.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.111
Threshold uncertainty score0.511

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.233
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations75
Published2006
Admission routes1
Has abstractyes

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