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Record W2120601783 · doi:10.1139/z07-059

Genetic variation and evidence for population structure in eastern North Pacific false killer whales (<i>Pseudorca crassidens</i>)

2007· article· en· W2120601783 on OpenAlexvenueno aff
Susan J. Chivers, Robin W. Baird, Daniel J. McSweeney, Daniel L. Webster, Nicole M. Hedrick, Juan Carlos Salinas

Bibliographic record

VenueCanadian Journal of Zoology · 2007
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine animal studies overview
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyPopulationmtDNA control regionPhylogeographyFisheryHaplotypeZoologyEcologyPhylogeneticsDemographyAlleleGenetics

Abstract

fetched live from OpenAlex

False killer whales ( Pseudorca crassidens (Owen, 1846)) are incidentally taken in the North Pacific pelagic long-line fishery, but little is known about their population structure to assess the impact of these takes. Using mitochondrial DNA (mtDNA) control region sequence data, we quantified genetic variation for the species and tested for genetic differentiation among geographic strata. Our data set of 124 samples included 115 skin-biopsy samples collected from false killer whales inhabiting the eastern North Pacific Ocean (ENP), and nine samples collected from animals sampled at sea or on the beach in the western North Pacific, Indian, and Atlantic oceans. Twenty-four (24) haplotypes were identified, and nucleotide diversity was low (π = 0.37%) but comparable with that of closely related species. Phylogeographic concordance in the distribution of haplotypes was revealed and a demographically isolated population of false killer whales associated with the main Hawaiian islands was identified (ΦST= 0.47, p < 0.0001). This result supports recognition of the existing management unit, which has geo-political boundaries corresponding to the USA’s exclusive economic zone (EEZ) of Hawai‘i. However, a small number of animals sampled within the EEZ but away from the near-shore island area, which is defined as <25 nautical miles (1 nautical mile = 1.852 km) from shore, had haplotypes that were the same or closely related to those found elsewhere in the ENP, which suggests that there may be a second management unit within the Hawaiian EEZ. Biologically meaningful boundaries for the population(s) cannot be identified until we better understand the distribution and ecology of false killer whales.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.030

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.244
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations64
Published2007
Admission routes1
Has abstractyes

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