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Gene flow, adaptive population divergence and comparative population structure across loci

2003· article· en· W2121180364 on OpenAlexaff
Robert G. Latta

Bibliographic record

VenueNew Phytologist · 2003
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsDalhousie University
Fundersnot available
KeywordsBiologyQuantitative trait locusLinkage disequilibriumEvolutionary biologyPopulationSelection (genetic algorithm)Divergence (linguistics)GeneticsAllele frequencyTraitQuantitative geneticsAlleleGenetic variationGeneHaplotype

Abstract

fetched live from OpenAlex

Summary Many recent studies have sought to identify targets of diversifying selection by testing the neutral expectation that all loci will show similar levels of population divergence ( F st ). Contrasts between quantitative traits ( Q st ) and molecular markers ( F st ) suggest that quantitative traits typically diverge in response to local selection pressures more than do individual genes. Coalescence theory makes it possible to simulate the distribution of F st and Q st expected under neutrality for many situations, including nonequilibrium conditions. Such simulations show that a very high variance of F st and Q st are expected under neutrality, making it difficult to draw firm conclusions about the action of selection on individual loci or traits. Recent quantitative genetic theory shows that, under diversifying selection on quantitative traits, covariances (linkage disequilibrium) among allele frequencies at underlying additive loci contribute a substantial fraction of the among‐population trait variance. Thus, adaptive trait divergence can be accomplished, with limited divergence of allele frequencies. However, the contribution of covariances among loci to the divergence of traits depends upon there being multiple loci underlying quantitative trait variation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.041
Threshold uncertainty score0.489

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.278
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations95
Published2003
Admission routes1
Has abstractyes

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