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Short Communication: Optimal Random Regression Models for Milk Production in Dairy Cattle

2006· article· en· W2122115103 on OpenAlexaffabout
Yikang Liu, J. Zhang, L.R. Schaeffer, Runqing Yang, W.L. Zhang

Bibliographic record

VenueJournal of Dairy Science · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsAkaike information criterionBayesian information criterionDeviance information criterionStatisticsMathematicsGibbs samplingInformation CriteriaResidualVariance (accounting)Bayes' theoremCovariateBayes factorModel selectionRandom effects modelRegressionBayesian probabilityEconometricsBayesian inferenceAlgorithm

Abstract

fetched live from OpenAlex

Legendre polynomials of orders 3 to 8 in random regression models (RRM) for first-lactation milk production in Canadian Holsteins were compared statistically to determine the best model. Twenty-six RRM were compared using LP of order 5 for the phenotypic age-season groupings. Variance components of RRM were estimated using Bayesian estimation via Gibbs sampling. Several statistical criteria for model comparison were used including the total residual variance, the log likelihood function, Akaike's information criterion, the Bayesian information criterion, Bayes factors, an information-theoretic measure of model complexity, and the percentage relative reduction in complexity. The residual variance always picks the model with the most parameters. The log likelihood and information-theoretic measure picked the model with order 5 for additive genetic effects and order 7 for permanent environmental effects. The currently used model in Canada (order 5 for both additive and permanent environmental effects) was not the best for any single criterion, but was optimal when considering all criteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.043
Threshold uncertainty score0.086

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.019
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.278
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations30
Published2006
Admission routes2
Has abstractyes

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