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Cloning, expression and localization of a trypsin‐like serine protease in the spruce budworm, <i>Choristoneura fumiferana</i>

2009· article· en· W2123255635 on OpenAlexafffund
Wenying He, Yiping Zheng, Lin Tang, Catherine Béliveau, Daniel Doucet, Michel Cusson

Bibliographic record

VenueInsect Science · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInsect Resistance and Genetics
Canadian institutionsCanadian Forest ServiceOntario Forest Research Institute
FundersNatural Science Foundation of Guangdong ProvinceOntario GenomicsOntario Genomics InstituteGenome Canada
KeywordsBiologySerine proteaseTrypsinHemolymphMolecular biologyComplementary DNASpruce budwormSerineBiochemistryChoristoneura fumiferanaProteasecDNA libraryEnzymeGeneBotanyTortricidae

Abstract

fetched live from OpenAlex

Abstract A trypsin‐like molting‐related serine protease cDNA ( Cf MRSP) was cloned from the spruce budworm, Choristoneura fumiferana . The full‐length Cf MRSP complementary DNA (cDNA) encoded a 43 kDa protein that contained a trypsin‐like serine protease catalytic domain, but no clip domain. The C‐terminal extension contained five cystein residues, which may allow the protein to form a homodimer through interchain disulfide bonds and regulate the activity of Cf MRSP. Phylogenetic tree analysis showed that Cf MRSP clusters with lepidopteran homologues such as serine protease 1 of Lonomia obliqua , hemolymph proteinase 20 (HP20), pattern recognition serine proteinase precursor (ProHP14) and a trypsin‐like protein of Manduca sexta . Northern blot analysis of developmental expression of Cf MRSP indicated that its transcripts were found primarily in the epidermis and were produced during all of the tested stadia, from 4th instar larvae to pupae, but increased levels of Cf MRSP transcripts were always found after each molt. A high level of the protein was found in the epidermis by immunohistochemistry analysis. Altogether these data suggest that Cf MRSP plays a role in the epidermis during molting and metamorphosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.249
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2009
Admission routes2
Has abstractyes

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