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Record W2124990309 · doi:10.1139/b05-069

Carbon acquisition mechanisms by planktonic desmids and their link to ecological distribution

2005· article· en· W2124990309 on OpenAlexvenueno aff
Elly Spijkerman, Stephen C. Maberly, Peter F. M. Coesel

Bibliographic record

VenueCanadian Journal of Botany · 2005
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsnot available
FundersNatural Environment Research Council
KeywordsBiologyBotanyDissolved organic carbonEcologyPlankton

Abstract

fetched live from OpenAlex

To test if different inorganic carbon (Ci) uptake mechanisms underlie the ecological distribution pattern of planktonic desmids, we performed pH-drift experiments with 12 strains, belonging to seven species, originating from lakes of different pH. Staurastrum brachiatum Ralfs and Staurodesmus cuspidatus (Ralfs) Teil. var. curvatus (W. West) Teil., species confined to acidic, soft water habitats, showed remarkably different behavior in the pH drift experiments: S. brachiatum appeared to use CO2 only, whereas Staurodesmus cuspidatus appeared to use HCO3– as well. Staurastrum chaetoceras (Schr.) Smith and Staurastrum planctonicum Teil, species well-known for their abundant occurrence in alkaline waters, were the most effective at using HCO3–. Other species, to be encountered in both slightly acidic and slightly alkaline waters, took an intermediate position. Experiments using specific inhibitors suggested that Cosmarium abbreviatum Rac. var. planctonicum W. & G.S. West and S. brachiatum use CO2 by an active CO2 uptake mechanism, whereas S. chaetoceras and Staurodesmus cuspidatus showed an active HCO3– uptake pattern. Most likely, these active uptake mechanisms make use of H+-ATPase, as none of the desmids expressed significant carbonic anhydrase activity. A series of strains of Staurastrum planctonicum isolated from different habitats, all clustered in between the species using HCO3–, but no further differentiation was observed. Therefore, desmids cannot be simply characterized as exclusive CO2 users, and the ecological distribution pattern of a desmid species does not unequivocally link to a certain Ci uptake mechanism. Nevertheless, there does appear to be a general ecological link between a species' Ci uptake mechanism and its ecological distribution.Key words: pH drift, desmids, isolate variation, inorganic carbon acquisition.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.164
Teacher spread0.159 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2005
Admission routes1
Has abstractyes

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