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Record W2125485599 · doi:10.4319/lo.2003.48.3.1069

Photochemical reactivity of siderophores produced by marine heterotrophic bacteria and cyanobacteria based on characteristic Fe(III) binding groups

2003· article· en· W2125485599 on OpenAlexaff
Katherine A. Barbeau, Eden L. Rue, Charles G. Trick, Kenneth W. Bruland, Alison Butler

Bibliographic record

VenueLimnology and Oceanography · 2003
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsWestern University
Fundersnot available
KeywordsSiderophoreCarboxylateChemistryReactivity (psychology)FerricCyanobacteriaPhotochemistryBacteriaInorganic chemistryStereochemistryBiochemistryBiology

Abstract

fetched live from OpenAlex

Siderophores, high‐affinity Fe(III) ligands produced by microorganisms to facilitate iron acquisition, might contribute significantly to dissolved Fe(III) complexation in ocean surface waters. In previous work, we demonstrated the photoreactivity of the ferric ion complexes of several α‐hydroxy carboxylic acid—containing siderophores produced by heterotrophic marine bacteria. Here, we expand on our earlier studies and detail the photoreactivity of additional siderophores produced by both heterotrophic marine bacteria and marine cyanobacteria, making comparisons to synthetic and terrestrial siderophores that lack the α‐hydroxy carboxylate group. Our results suggest that, in addition to secondary photochemical reaction pathways involving reactive oxygen species, direct photolysis of Fe(III)‐siderophore complexes might be a significant source of Fe(II) and reactive Fe(III) in ocean surface waters. Our findings further indicate that the photoreactivity of siderophores is primarily determined by the chemical structure of the Fe(III) binding groups that they possess—hydroxamate, catecholate, or α‐hydroxy carboxylate moieties. Hydroxamate groups are photochemically resistant regardless of Fe(III) complexation. Catecholates, in contrast, are susceptible to photooxidation in the uncomplexed form but stabilized against photooxidation when ferrated. α‐Hydroxy carboxylate groups are stable as the uncomplexed acid, but when coordinated to Fe(III), these moieties undergo light‐induced ligand oxidation and reduction of Fe(III) to Fe(II). These photochemical properties appear to determine the reactivity and fate of Fe(III)‐binding siderophores in ocean surface waters, which in turn might significantly influence the biogeochemical cycling of iron.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.043
Threshold uncertainty score0.771

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.179
Teacher spread0.173 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations256
Published2003
Admission routes1
Has abstractyes

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