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Record W2126411676 · doi:10.1093/aje/kwr453

New Models for Large Prospective Studies: Is There a Better Way?

2012· article· en· W2126411676 on OpenAlexaff
Teri A. Manolio, Brenda K. Weis, Catherine C. Cowie, Robert N. Hoover, Kathy Hudson, Barnett S. Kramer, Chris Berg, Rory Collins, Wendy Ewart, J. Michael Gaziano, Steven Hirschfeld, Pamela M. Marcus, Daniel R. Masys, Catherine A. McCarty, John McLaughlin, Alpa V. Patel, Tim Peakman, Nancy L. Pedersen, Catherine Schaefer, Joan Scott, Timothy Sprosen, Mark Walport, Francis S. Collins

Bibliographic record

VenueAmerican Journal of Epidemiology · 2012
Typearticle
Languageen
FieldEnvironmental Science
TopicHealth, Environment, Cognitive Aging
Canadian institutionsOntario Institute for Cancer Research
FundersNational Institutes of HealthWellcome Trust
KeywordsBiobankResource (disambiguation)Health careScale (ratio)Process (computing)ScheduleMedicinePublic relationsBusinessData scienceOperations researchComputer sciencePolitical scienceEngineeringBioinformatics

Abstract

fetched live from OpenAlex

Large prospective cohort studies are critical for identifying etiologic factors for disease, but they require substantial long-term research investment. Such studies can be conducted as multisite consortia of academic medical centers, combinations of smaller ongoing studies, or a single large site such as a dominant regional health-care provider. Still another strategy relies upon centralized conduct of most or all aspects, recruiting through multiple temporary assessment centers. This is the approach used by a large-scale national resource in the United Kingdom known as the "UK Biobank," which completed recruitment/examination of 503,000 participants between 2007 and 2010 within budget and ahead of schedule. A key lesson from UK Biobank and similar studies is that large studies are not simply small studies made large but, rather, require fundamentally different approaches in which "process" expertise is as important as scientific rigor. Embedding recruitment in a structure that facilitates outcome determination, utilizing comprehensive and flexible information technology, automating biospecimen processing, ensuring broad consent, and establishing essentially autonomous leadership with appropriate oversight are all critical to success. Whether and how these approaches may be transportable to the United States remain to be explored, but their success in studies such as UK Biobank makes a compelling case for such explorations to begin.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.505
metaresearch head score (Gemma)0.622
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.495
Threshold uncertainty score0.610

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.5050.622
Meta-epidemiology (narrow)0.0050.004
Meta-epidemiology (broad)0.0100.007
Bibliometrics0.0060.007
Science and technology studies0.0040.020
Scholarly communication0.0210.038
Open science0.0140.014
Research integrity0.0110.026
Insufficient payload (model declined to judge)0.0250.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.067
GPT teacher head0.367
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations143
Published2012
Admission routes1
Has abstractyes

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