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Record W2129119999 · doi:10.1086/651681

The Challenge of Reducing Invasive Pneumococcal Disease in Indigenous Indian Populations

2010· letter· en· W2129119999 on OpenAlexaff
Otto G. Vanderkooi, James D. Kellner

Bibliographic record

VenueClinical Infectious Diseases · 2010
Typeletter
Languageen
FieldMedicine
TopicPneumonia and Respiratory Infections
Canadian institutionsAlberta Children's HospitalAlberta Health ServicesUniversity of Calgary
Fundersnot available
KeywordsPneumococcal diseaseMedicineIndigenousPneumococcal infectionsStreptococcus pneumoniaeDiseaseIntensive care medicineMicrobiologyInternal medicineAntibioticsEcologyBiology

Abstract

fetched live from OpenAlex

Wherever it has been introduced into routine infant vaccination programs, the 7-valent pneumococcal conjugate vaccine (PCV7) has rapidly and very effectively reduced vaccine serotype (VT) invasive pneumococcal infections and related disease both in vaccine recipients and in unvaccinated children and adults through indirect protection. In some jurisdictions, VT invasive infections have been nearly eradicated, as has antecedent nasopharyngeal colonization with VTs. In turn, the large decrease in VT infections has been offset, to varying extent, by increased infections caused by a limited number of nonvaccine serotypes (NVTs)—particularly serotype 19A, which is often resistant to multiple antibiotics. Overall nasopharyngeal colonization rates have not changed, because the decrease in VT colonization has been completely offset by increases in colonization with NVTs. The effectiveness of PCV7 in indigenous populations compared with nonindigenous populations in the United States and Australia has been particularly remarkable, given the much higher rates of invasive pneumococcal infections in these populations before PCV7 introduction, compared with nonindigenous children. In Alaska, the incidence of invasive pneumococcal infections was 3 times higher among Alaska Native children aged <2 years than among non-Alaska Native children aged <2 years before the introduction of PCV7 (403 vs 135 cases per 100,000 population per year from 1995 to 2000) [1]. From 2004 to 2006, after the introduction of PCV7, the incidence of VT invasive pneumococcal infections decreased to similar levels in both groups (10 vs 2 cases per 100,000 population per year, respectively). For all ages combined, the incidence of VT invasive pneumococcal infection decreased by 90% over the same time period. As for NVT invasive pneumococcal infection, the incidence in Native Alaskans did not initially change after the introduction of PCV7. However, by 2004–2006 (4–6 years after PCV7 introduction), NVT invasive infections increased by 130% among Alaska Native children aged <2 years, and serotype 19A was the most common NVT. The overall rate of invasive pneumococcal infection in this group increased to 245 cases per 100,000 population per year, which was still 39% less than before PCV7 was introduced. In contrast, among non-Alaska Native children, the incidence of NVT invasive pneumococcal infections did not increase throughout the study period, and the overall decrease in invasive pneumococcal infection by 2004–2006 among children aged <2 years was 68%.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.019
Threshold uncertainty score0.039

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.010
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0020.002
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0080.008
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.365
Teacher spread0.313 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2010
Admission routes1
Has abstractyes

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